DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18764 and CG6808

DIOPT Version :9

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001247055.1 Gene:CG6808 / 41394 FlyBaseID:FBgn0037921 Length:375 Species:Drosophila melanogaster


Alignment Length:428 Identity:97/428 - (22%)
Similarity:167/428 - (39%) Gaps:101/428 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCGSIIYNKMPKNLFHIENEKMLQDINLVTGTTLHNDPELPSSICACCTLDLNQAILFRERCI 69
            ||||.........::||.....|:|..   ..||::..|..||..||..|.:.|.:...|...|.
  Fly    10 CRTCRKKGTQSTLQSLFESNAHKLLIS---YAGTSVKPDDGLPDQICTVCLMQLEEVDRFLSACK 71

  Fly    70 LTQ---KQLVHRR-RSPEAKEPAEDVEEMASPPDCL----------NDPFG-EVDEYIVESPEE- 118
            .:.   :.||.:. .|..|.|..||.:::.......          .:|.. :..|..:|:.:: 
  Fly    72 QSDAHLRSLVRQTLSSASAFETLEDKDQLEQKKRARKQNISGRLIEENPINFKTQENALETTKDD 136

  Fly   119 ------------VLDHDSDAHH--DLDEDNYIDSVEDVDALQDMAE--VAEEDSQDVESLISSVQ 167
                        |.|.:.:|.:  |:.:::|  ::.|:|..:::::  .:|..||:..:...|:|
  Fly   137 EILPINKFSSDFVFDLNVNAENEKDIHQEDY--TISDMDLDREISDQNYSETYSQESSAATDSIQ 199

  Fly   168 KELESICNDDSNSDNNDYMEPQNGSYFNETINEYEVSSNPNTPLPESKSAAGRSTKPATTKPKRK 232
            :..|...|.:.::|                   |.:.             .|.:.:|        
  Fly   200 ETSEDYHNLEPSAD-------------------YVID-------------LGVACEP-------- 224

  Fly   233 KQYVTWKNMTEEQIIERKRLQRKRECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRFYT 297
                           ::.|        |:.|...:...|....|...|...|:..|:.|.|.|..
  Fly   225 ---------------DKYR--------CKICSNTYRCLSQLNAHSQVHRKEKDHQCEVCQKTFRA 266

  Fly   298 DHLMTLHQRIIHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKRHE 362
            ...:..|.| .|.|||||.|.:|::.|.:::|...|||.|||.:||:|:.|.|.|..:|.|..|.
  Fly   267 ACNLKTHMR-THTGEKPYQCCYCSRRFADNSTHRKHERLHTNERPYACNICGKTFSLSSSRNAHY 330

  Fly   363 LIHTGVRAFACTICKQSFQRNTHLKAHLRSKFHTAKAK 400
            .:|:..::..|.:||:.|:....|.||.:|..|...||
  Fly   331 YLHSSEKSHKCLMCKKEFRLKHQLTAHEKSLAHRLIAK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 19/72 (26%)
C2H2 Zn finger 260..280 CDD:275368 4/19 (21%)
zf-H2C2_2 272..297 CDD:290200 7/24 (29%)
C2H2 Zn finger 288..309 CDD:275368 6/20 (30%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..391 CDD:275368 7/17 (41%)
CG6808NP_001247055.1 zf-AD 9..79 CDD:214871 19/71 (27%)
C2H2 Zn finger 229..249 CDD:275368 4/19 (21%)
zf-C2H2 255..277 CDD:278523 6/22 (27%)
C2H2 Zn finger 257..277 CDD:275368 6/20 (30%)
zf-H2C2_2 269..293 CDD:290200 10/24 (42%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
zf-H2C2_2 299..321 CDD:290200 11/21 (52%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
C2H2 Zn finger 341..359 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I8018
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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