DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18764 and pita

DIOPT Version :9

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:497 Identity:114/497 - (22%)
Similarity:183/497 - (36%) Gaps:111/497 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALQCRTCGSIIYNKMPKNLFHIENEKMLQDINL------VTGTTLHNDPELPSSICACCTLDLN 59
            |..:.|.|...:..:...::|. ||.::....||      :|...::....:|..||..|.|...
  Fly    11 MLTEKRVCRFCLTEQKLASIFE-ENPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFE 74

  Fly    60 QAILFRERC-----ILTQKQLVHRRRSPEAKE---------------PAEDVEEMASPPDCLNDP 104
            ....|::.|     :|.|..|.....||..|.               ||:..|...:|...||..
  Fly    75 HCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTM 139

  Fly   105 FGEVDEYIVE------------------SPEEVLDHDSDAHHDLDEDNYIDSVEDVDALQDMAEV 151
            .....:.|:|                  ||.....|..:...|.:::..:|.|:.:  |:|||..
  Fly   140 AKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSM--LEDMASE 202

  Fly   152 AEEDSQDVESLISSVQKELESICNDDS----NSDNNDYMEPQ------------NGSYFNETINE 200
            .|::..|:....|.|:.:   :.|..|    |......:||:            |.:...|.::.
  Fly   203 LEKEFPDIPQKASPVKPK---VLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDS 264

  Fly   201 YEVSSNPNTPLPESKSAAGRSTKPATTK---PKRKKQYVTWKNMTEEQIIERKRLQ--RKRECVC 260
                   :.||.:.......:.|.||..   |..::.:..      :|::|..||.  |.|...|
  Fly   265 -------DLPLDDQDDPTKNAEKVATDVFPCPDCERSFPL------QQLLEIHRLNHTRSRSFQC 316

  Fly   261 EQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRFYTDHLMTLHQRI------------------ 307
            ..|.:.|..:.:...|...|||.:.|.|..|.|.|....|:..|:|.                  
  Fly   317 LLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLS 381

  Fly   308 ---------IHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKRHEL 363
                     .||.::|:.|..|||||........||..|:...|:.|.||::.|.:||...||.:
  Fly   382 RQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLV 446

  Fly   364 IHTGVRAFACTICKQSFQRNTHLKAHLRSKFHTAKAKTIGAE 405
            .|.|.||:.|..|.:|:..:.||..|||:...|:.|..:.:|
  Fly   447 AHAGKRAYPCKYCHKSYMLSHHLSRHLRTHTQTSDASFVCSE 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 17/81 (21%)
C2H2 Zn finger 260..280 CDD:275368 4/19 (21%)
zf-H2C2_2 272..297 CDD:290200 9/24 (38%)
C2H2 Zn finger 288..309 CDD:275368 7/47 (15%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
C2H2 Zn finger 345..365 CDD:275368 8/19 (42%)
C2H2 Zn finger 373..391 CDD:275368 6/17 (35%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 15/75 (20%)
COG5048 <281..506 CDD:227381 60/214 (28%)
C2H2 Zn finger 288..308 CDD:275368 5/25 (20%)
C2H2 Zn finger 316..336 CDD:275368 4/19 (21%)
zf-H2C2_2 328..353 CDD:290200 9/24 (38%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
C2H2 Zn finger 372..388 CDD:275370 0/15 (0%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 8/19 (42%)
C2H2 Zn finger 486..506 CDD:275368 1/3 (33%)
HARE-HTH <566..625 CDD:294801
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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