DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18764 and CG44002

DIOPT Version :10

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:422 Identity:104/422 - (24%)
Similarity:162/422 - (38%) Gaps:104/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALQCRTCGSIIYNKMPKNLFHIENEKMLQDINL--------VTGTTLHNDPELPSSICACCTLD 57
            |..:||.|.:     ..||:.:|..|:  ||:.:        .||..:.....||.|||..|..|
  Fly     1 MENKCRVCLA-----SSKNMVNIFEER--QDLPVSIAHMIIECTGFKVEKGDSLPHSICPPCVKD 58

  Fly    58 LNQAILFRERCILTQKQLVHRRRSPEAKEPAEDVEEMASPPDCLNDPFGEVDEYIVESPEEVLDH 122
            .:.|...    |.|.:      ||.:.                    |.||.:.::|        
  Fly    59 AHNAFTI----IKTYE------RSYQV--------------------FYEVQDTVLE-------- 85

  Fly   123 DSDAHHDLDEDNYIDSVEDVDALQDMAEVAEEDSQDVESLIS---------SVQKELESICNDDS 178
                 .:|.||..|:       |.|..||...|.|:.:..:|         |.|:|.::..:|:.
  Fly    86 -----EELSEDVIIE-------LSDSDEVILIDEQEEKVHLSENKAPTNEVSTQEESKTAQSDNV 138

  Fly   179 NSDNNDYMEPQNGSYFNETINEYEVSSNPNTPLPESKSAAGRSTKPATTKPKRKKQYVTWKNMTE 243
            :.|........:.|:....:.|..:..:..|..|...|    ||.....|              |
  Fly   139 SEDKGHICTQCHMSFRRPGLLELHILRHHTTDGPRPMS----STSEHAVK--------------E 185

  Fly   244 EQIIERKRLQRKRECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRF-----YTDHLMTL 303
            |...:.::|.|.....|..|.:.|..:::...|...|||.|.|||:.|.|.|     ...||.| 
  Fly   186 ELRTKARQLSRNSTHTCRLCNKTFCSKASCVRHQKTHTGEKPFACEICQKPFADLASVKRHLRT- 249

  Fly   304 HQRIIHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKRHELIHTGV 368
                 |.||:|:.|..|..:|.:.:....|.|.||..:||.|..|||.|:..|..::|.:.||..
  Fly   250 -----HTGERPFKCLTCQSAFSDGSALRQHIRIHTGERPYKCDMCDKFFRERSDARKHMMSHTAE 309

  Fly   369 RAFACTICKQSFQRNTHLKAHLRSKFHTAKAK 400
            :.|.|:.|::.|::...|:.|:: ..||.|.:
  Fly   310 KRFKCSQCERRFRQPKGLRRHVK-LCHTDKVE 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871 21/78 (27%)
C2H2 Zn finger 260..280 CDD:275368 4/19 (21%)
zf-H2C2_2 272..297 CDD:463886 11/29 (38%)
C2H2 Zn finger 288..309 CDD:275368 7/25 (28%)
C2H2 Zn finger 317..337 CDD:275368 5/19 (26%)
zf-H2C2_2 333..354 CDD:463886 11/20 (55%)
C2H2 Zn finger 345..365 CDD:275368 7/19 (37%)
C2H2 Zn finger 373..391 CDD:275368 5/17 (29%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 23/86 (27%)
C2H2 Zn finger 146..166 CDD:275368 2/19 (11%)
COG5048 <162..302 CDD:227381 46/163 (28%)
C2H2 Zn finger 202..222 CDD:275368 4/19 (21%)
C2H2 Zn finger 230..250 CDD:275368 7/25 (28%)
C2H2 Zn finger 258..278 CDD:275368 5/19 (26%)
SUF4-like 282..>342 CDD:411020 20/60 (33%)
C2H2 Zn finger 286..311 CDD:411020 9/24 (38%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..335 CDD:411020 5/21 (24%)
C2H2 Zn finger 314..333 CDD:275368 5/19 (26%)

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