DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18764 and ZSCAN1

DIOPT Version :9

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_006723212.1 Gene:ZSCAN1 / 284312 HGNCID:23712 Length:448 Species:Homo sapiens


Alignment Length:320 Identity:70/320 - (21%)
Similarity:110/320 - (34%) Gaps:101/320 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 IDSVEDVDALQDMAEVAEEDSQDVESLISSVQKE--------LESICNDDSNSDNNDYMEPQNGS 192
            :||||.    ||.:...|||.:...|     |||        |:::....:..:.::::|.....
Human   168 LDSVEP----QDWSFGEEEDGKSPRS-----QKEPSQASELILDAVAAAPALPEESEWLETTQLQ 223

  Fly   193 YFNETINEYE-------VSSNPNTPL-------PE----SKSAAGRSTKPATTKPKRKKQYVTWK 239
            ....|..|.|       :.|....||       ||    ..|:..|:.....:.|         |
Human   224 QSLHTRAEAEAPRAPGLLGSRARLPLKPSIWDEPEDLLAGPSSDLRAEGTVISSP---------K 279

  Fly   240 NMTEEQIIERKRLQRKRECVCEQCGRQFTDQSNFKLHMLRHT-------------------GNKN 285
            ..:.::|..|:|             .:.||||......|:||                   |.:.
Human   280 GPSAQRISPRRR-------------NRNTDQSGRHQPSLKHTKGGTQEAVAGISVVPRGPRGGRP 331

  Fly   286 FACQQCGKRF-YTDHLMTLHQRIIHQGEKPYDCRFCTKSFHNSNTRLIHERTHTNAKPYSCHHCD 349
            |.|..||..| :..|.:. ||: .|:.|.|:.|..|.|.|.:::....|.:.|....|..     
Human   332 FQCADCGMVFTWVTHFIE-HQK-THREEGPFPCPECGKVFLHNSVLTEHGKIHLLEPPRK----- 389

  Fly   350 KCFKSASGRKRHELI------------HTGVRAFACTICKQSFQRNTHLKAHLRSKFHTA 397
               |:...:...|.:            .:..|.|.|::|.::|....||..|  .|.|||
Human   390 ---KAPRSKGPRESVPPRDGAQGPVAPRSPKRPFQCSVCGKAFPWMVHLIDH--QKLHTA 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871
C2H2 Zn finger 260..280 CDD:275368 5/19 (26%)
zf-H2C2_2 272..297 CDD:290200 9/44 (20%)
C2H2 Zn finger 288..309 CDD:275368 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 5/19 (26%)
C2H2 Zn finger 345..365 CDD:275368 2/31 (6%)
C2H2 Zn finger 373..391 CDD:275368 6/17 (35%)
ZSCAN1XP_006723212.1 SCAN 75..162 CDD:280241
C2H2 Zn finger 334..354 CDD:275368 7/21 (33%)
zf-H2C2_2 346..371 CDD:290200 10/26 (38%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..442 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4733
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.