DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18764 and blmp-1

DIOPT Version :9

Sequence 1:NP_652712.2 Gene:CG18764 / 59239 FlyBaseID:FBgn0042205 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001251370.1 Gene:blmp-1 / 172917 WormBaseID:WBGene00003847 Length:817 Species:Caenorhabditis elegans


Alignment Length:139 Identity:44/139 - (31%)
Similarity:69/139 - (49%) Gaps:3/139 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 KRECVCEQCGRQFTDQSNFKLHMLRHTGNKNFACQQCGKRF-YTDHLMTLHQRIIHQGEKPYDCR 318
            |....|:.|.:.|...||.|:|:..|||.:.|.|:.|.|.| ...||...|  ::|.||:|:.|.
 Worm   505 KTRYACKDCNKTFGQLSNLKVHVRTHTGERPFKCEICTKEFTQLAHLQKHH--LVHTGERPHRCD 567

  Fly   319 FCTKSFHNSNTRLIHERTHTNAKPYSCHHCDKCFKSASGRKRHELIHTGVRAFACTICKQSFQRN 383
            .|.|.|.:::....|.|.|...|||:|..||..|......:.|:.:|...|.::|..|.:.:...
 Worm   568 ICDKRFSSTSNLKTHLRLHNGQKPYTCDVCDAKFTQYVHLRLHKRLHANERPYSCGTCGKKYISP 632

  Fly   384 THLKAHLRS 392
            :.|:.|.::
 Worm   633 SGLRTHWKT 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18764NP_652712.2 zf-AD 4..75 CDD:214871
C2H2 Zn finger 260..280 CDD:275368 7/19 (37%)
zf-H2C2_2 272..297 CDD:290200 11/25 (44%)
C2H2 Zn finger 288..309 CDD:275368 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
C2H2 Zn finger 345..365 CDD:275368 5/19 (26%)
C2H2 Zn finger 373..391 CDD:275368 4/17 (24%)
blmp-1NP_001251370.1 SET 119..247 CDD:214614
zf-C2H2 508..530 CDD:278523 7/21 (33%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
zf-H2C2_2 522..547 CDD:290200 11/24 (46%)
C2H2 Zn finger 538..558 CDD:275368 7/21 (33%)
zf-H2C2_2 550..575 CDD:290200 11/26 (42%)
C2H2 Zn finger 566..586 CDD:275368 6/19 (32%)
zf-H2C2_2 578..603 CDD:290200 10/24 (42%)
C2H2 Zn finger 594..614 CDD:275368 5/19 (26%)
zf-H2C2_2 606..631 CDD:290200 5/24 (21%)
ARS2 <620..772 CDD:282772 4/22 (18%)
C2H2 Zn finger 622..641 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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