DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17242 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_722787.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:235 Identity:72/235 - (30%)
Similarity:110/235 - (46%) Gaps:34/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IGIEQA-----PWQASVQINDKHHCGGVIYSEDIILTIAECVRKARLEFISVRVGSAQENAG--G 79
            ||..||     |||.|:|:|:.|||||.:.|...:||.|.|.|.         ..:.|:...  |
  Rat   187 IGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHCFRS---------YSNPQQWTATFG 242

  Fly    80 TVLKVEKMRLQVLGL----------RPSDVAILQLRSPLYLDGGIR--AIPLATIPLVPGTNASV 132
            ......::|::|..:          |.:|:|::||..|:.....|.  .:|.||..::|.:.|.|
  Rat   243 VSTISPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPAATQNIIPDSVAYV 307

  Fly   133 SGWGQLSAMNPSSEVLLRVDVKIQDQLMCATNLALKGRLMSVGEICAAPAGEIPYACQGFVGGPL 197
            :|||.|:....:...|.:.:|:|....:|.......|.::. |.:||........||||..||||
  Rat   308 TGWGSLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGGSVLP-GMLCAGVRSGAVDACQGDSGGPL 371

  Fly   198 VANN--RLY---GILSWQSACDVLNKSSVYANIAMFKVWI 232
            |..:  ||:   ||:||...|.:.||..||..:..::.||
  Rat   372 VQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17242NP_722787.1 Tryp_SPc 24..235 CDD:238113 70/233 (30%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 72/235 (31%)
Blue background indicates that the domain is not in the aligned region.

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