DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17242 and Send2

DIOPT Version :10

Sequence 1:NP_722787.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster


Alignment Length:249 Identity:89/249 - (35%)
Similarity:132/249 - (53%) Gaps:33/249 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLKGILLLVSIAQIAA-----------DFKSIGIEQAPWQASVQINDKHHCGGVIYSEDIILTI 54
            |.::..|||:::..::|           ..:.||||:||||.|:|.:.||.|||.|||.|||:|.
  Fly     1 MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITA 65

  Fly    55 AECVRKARLEFISVRVGSAQENAGGTVLKVEKMRL-QVLGLRPSDVAILQLRSPLYLDGGIRAIP 118
            |.||:.   :...||.|||.:|:.|:|:.|..:|. :.||   :|:||::|..||.....::.||
  Fly    66 AHCVQG---QGYQVRAGSALKNSNGSVVDVAAIRTHEGLG---NDIAIVRLSKPLEFTNQVQPIP 124

  Fly   119 LATIPLVPGTNASVSGWGQLSAMNPSSEVLLRVDVKIQDQLMCATNLALKGRLMSVGEICAAPAG 183
            ||.....||:.|.|||||..|..:...: |..|::.||....|.        |.....|||...|
  Fly   125 LAKTNPPPGSIAFVSGWGSSSYYSHPID-LQGVNLYIQWPYYCG--------LTEPSRICAGSFG 180

  Fly   184 EIPYACQGFVGGPLVANNRLYGILSWQSA-CDVLNKSSVYANIAMFKVWIESTV 236
            ..  ||:|..|||||.:.:|.|::|..:. |   ..||:|.::..|:.||.:.:
  Fly   181 RA--ACKGDSGGPLVFDQQLVGVVSGGTKDC---TYSSIYTSVPYFREWILNAI 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17242NP_722787.1 Tryp_SPc 24..235 CDD:238113 82/212 (39%)
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 82/218 (38%)

Return to query results.
Submit another query.