DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17242 and Tmprss3

DIOPT Version :10

Sequence 1:NP_722787.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:229 Identity:63/229 - (27%)
Similarity:97/229 - (42%) Gaps:19/229 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IEQAPWQASVQINDKHHCGGVIYSEDIILTIAECVR--------KARLEFISVRVGSAQENAGGT 80
            :.|.|||.|:|....|.|||.:.:...|:|.|.||.        ..::..:|:.......:....
  Rat   225 LTQWPWQVSLQFQGYHLCGGSVITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEK 289

  Fly    81 VLKVEKMRLQVLGLRPSDVAILQLRSPLYLDGGIRAI--PLATIPLVPGTNASVSGWGQL-SAMN 142
            ::...|.:.:.||   :|:|:::|..||..|..|:.|  |.:......|.....||||.. ....
  Rat   290 IIYHSKYKPKRLG---NDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGAG 351

  Fly   143 PSSEVLLRVDVKIQDQLMCATNLALKGRLMSVGEICAAPAGEIPYACQGFVGGPLVANNR----L 203
            .:|.||....|.:....:| .:..:.|.::|...:||........:|||..|||||...|    |
  Rat   352 DASPVLNHAAVPLISNKIC-NHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKL 415

  Fly   204 YGILSWQSACDVLNKSSVYANIAMFKVWIESTVK 237
            .|..|:...|..:||..||..|..|..||...::
  Rat   416 VGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17242NP_722787.1 Tryp_SPc 24..235 CDD:238113 63/225 (28%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747
Tryp_SPc 216..444 CDD:214473 61/222 (27%)
Blue background indicates that the domain is not in the aligned region.

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