DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17242 and Tmprss5

DIOPT Version :10

Sequence 1:NP_722787.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:226 Identity:70/226 - (30%)
Similarity:104/226 - (46%) Gaps:16/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PWQASVQINDKHHCGGVIYSEDIILTIAECVRKARLEFIS---VRVG-----SAQENAGGTVLKV 84
            ||||||.:..:|.||..:.:...::|.|.|:...||..:|   |..|     :.:::.|..|.|:
  Rat   220 PWQASVMLGSRHTCGASVLAPYWVVTAAHCMYSFRLSRLSSWRVHAGLVSHSAVRQHQGTMVEKI 284

  Fly    85 EKMRLQVLGLRPSDVAILQLRSPLYLDGGIRAI--PLATIPLVPGTNASVSGWGQLSAMNP-SSE 146
            ....|........|||:||||:|:.....:.|:  |........|:...|||||.....:. ||:
  Rat   285 IPHPLYSAQNHDYDVALLQLRTPINFSDTVSAVCLPAKEQHFPQGSQCWVSGWGHTDPSHTHSSD 349

  Fly   147 VLLRVDVKIQDQLMCATNLALKGRLMSVGEICAAPAGEIPYACQGFVGGPLVANN----RLYGIL 207
            .|....|.:....:|.::....|.| :...:||........||||..|||||..:    .|.|::
  Rat   350 TLQDTMVPLLSTDLCNSSCMYSGAL-THRMLCAGYLDGRADACQGDSGGPLVCPSGDTWHLVGVV 413

  Fly   208 SWQSACDVLNKSSVYANIAMFKVWIESTVKL 238
            ||...|...|:..|||.:|.|..||..||::
  Rat   414 SWGRGCAEPNRPGVYAKVAEFLDWIHDTVQV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17242NP_722787.1 Tryp_SPc 24..235 CDD:238113 68/221 (31%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747
Tryp_SPc 208..441 CDD:238113 68/221 (31%)
Blue background indicates that the domain is not in the aligned region.

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