DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and Tmprss11d

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:246 Identity:86/246 - (34%)
Similarity:114/246 - (46%) Gaps:43/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENIIVTAAHCFFDEEGNRLDDQGYQVRAGS 88
            |:|||||........|||||||....|.|||::.|...::||||||    .:..:.|.:....|.
  Rat   183 EERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHCF----RSYSNPQQWTATFGV 243

  Fly    89 ALTDSNGTLVDVAALIIHEEYAFDLNINDIAIVRLSTPLEFTSKVQPI--PLAKTNPYPRSIALV 151
            : |.|....|.|.|::.|.||......||||:|:|..|:.||..:..:  |.|..|..|.|:|.|
  Rat   244 S-TISPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPAATQNIIPDSVAYV 307

  Fly   152 SGWG-VSYILNDSTNLY--------------PTHLQGLALHIKSIFSCRLFDPSLLCAGTYGRT- 200
            :||| ::|..|..|||.              |....|..|            |.:||||..... 
  Rat   308 TGWGSLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGGSVL------------PGMLCAGVRSGAV 360

  Fly   201 -ACHGDSGGPLVVNKQ-----LVGVVSWGRKGCVSS--AFFVSVPYFREWI 243
             ||.||||||||....     :||:||||.:..:.:  ..:..|..:|.||
  Rat   361 DACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 83/242 (34%)
Tryp_SPc 27..243 CDD:238113 82/241 (34%)
Tmprss11dNP_001028824.2 SEA 48..150 CDD:396113
Tryp_SPc 186..414 CDD:238113 84/243 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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