DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17234 and zgc:100868

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_005164187.1 Gene:zgc:100868 / 554458 ZFINID:ZDB-GENE-040801-33 Length:654 Species:Danio rerio


Alignment Length:264 Identity:82/264 - (31%)
Similarity:129/264 - (48%) Gaps:39/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LDFLSAGQVNRWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENIIVTAAHCFFDEEGNR 76
            ||......:|   .||:||:...:...|||||||..|.|.||||:.:...|:||||||.:.    
Zfish    25 LDVCGTAPLN---SRIVGGQNAPVGAWPWQVSLQRDGSHFCGGSLINNQWILTAAHCFPNP---- 82

  Fly    77 LDDQGYQVRAG---SALTDSNGTLVDVAALIIHEEYAFDLNINDIAIVRLSTPLEFTSKVQPIPL 138
             ...|..|..|   .|..:|......|:.:|.|..|..|...|||.:::|::.:.|::.::||.|
Zfish    83 -STTGLLVYLGLQKLASFESYSMSSAVSNIIKHPNYNSDTEDNDITLLQLASTVSFSNYIRPICL 146

  Fly   139 AKTNP--YPRSIALVSGWGVSYILNDSTNL---YPTHLQGLALHIKSIFSC-------RLFDPSL 191
            |.::.  :..::..::|||     |.:|.:   .|..||.:.:.|.....|       ::.| ::
Zfish   147 AASDSTFFNGTLVWITGWG-----NTATGVSLPSPGTLQEVQVPIVGNRKCNCLYGVSKITD-NM 205

  Fly   192 LCAGTY--GRTACHGDSGGPLVVNKQLV----GVVSWGRKGCVSSAF---FVSVPYFREWILNAI 247
            :|||..  |:.:|.||||||:|..:..|    |:||:| .||....|   :..|..::.||...|
Zfish   206 VCAGLLQGGKDSCQGDSGGPMVSKQGSVWIQSGIVSFG-TGCAQPNFPGVYTRVSKYQSWIQQRI 269

  Fly   248 ASIQ 251
            .:.|
Zfish   270 TTTQ 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 75/240 (31%)
Tryp_SPc 27..243 CDD:238113 74/239 (31%)
zgc:100868XP_005164187.1 Tryp_SPc 36..265 CDD:214473 75/240 (31%)
Tryp_SPc 37..267 CDD:238113 76/241 (32%)
Tryp_SPc 331..509 CDD:304450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.