DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17234 and CLIPB18

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_001238237.1 Gene:CLIPB18 / 4578288 VectorBaseID:AGAP009215 Length:359 Species:Anopheles gambiae


Alignment Length:276 Identity:71/276 - (25%)
Similarity:109/276 - (39%) Gaps:59/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLALDFLSAGQVNRWEQRIIGGEPIGIEQVPWQVSLQYFG-DHVCGGSIYSENIIVTAAHCFFDE 72
            |..||....|..:  ..|:..|:...:.|.||...|.... ..||||::.:...::|||||.   
Mosquito    98 LATLDLEECGAYS--ADRMAYGQEARLFQFPWMALLMLNSVKFVCGGTLINRRYVLTAAHCL--- 157

  Fly    73 EGNRLDDQGYQVRAGS------ALTDSNGTL-------VDVAALIIHEEYAFDLNINDIAIVRLS 124
                .:.|...||.|.      ...|..|..       :.:...|:||.|:..|.:|||.::|::
Mosquito   158 ----KNTQVTTVRLGEFDISTPIDYDKRGDQHAPPPQDIAIEQTIVHEAYSTRLKVNDIGLIRMA 218

  Fly   125 TPLEFTSKVQPI--PLAKTNPYPRSIALVSGWG---------------VSYILNDSTNLYPTHLQ 172
            ....:...|.||  |::......::...|:|||               |:.:.||.         
Mosquito   219 EEAAYNDNVSPICLPVSPAMRTTQTTYFVAGWGATESAFYSNRLLFGKVALLTNDQ--------- 274

  Fly   173 GLALHIKSIFSCRLFDPSLLCA-GTYGRTACHGDSGGPL---VVNKQLV--GVVSWGRKGC---V 228
             .|.|:..:.|....:...:|| |......|.|||||||   .:|.:.|  ||||.|.:.|   .
Mosquito   275 -CAQHLLRVDSYTKINNDQMCAIGANLTDNCTGDSGGPLKTISINARYVQYGVVSLGLRTCGKQS 338

  Fly   229 SSAFFVSVPYFREWIL 244
            :...:..|..:.:|||
Mosquito   339 APGVYTRVENYADWIL 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 64/256 (25%)
Tryp_SPc 27..243 CDD:238113 63/255 (25%)
CLIPB18XP_001238237.1 Tryp_SPc 117..356 CDD:238113 66/255 (26%)
Tryp_SPc 117..353 CDD:214473 63/252 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.