DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and pafah1b3

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001006715.1 Gene:pafah1b3 / 448360 XenbaseID:XB-GENE-485956 Length:226 Species:Xenopus tropicalis


Alignment Length:76 Identity:22/76 - (28%)
Similarity:35/76 - (46%) Gaps:13/76 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ESFLLLLALDF--LSAG-QVNRWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENI---I 62
            |.|..|.||:|  ||.| |...|  |:..||   ::.|..::.:.:.|.:..|.|  :|.|   |
 Frog    61 ELFSPLHALNFGGLSDGTQHVLW--RLENGE---LDHVKPKIIVLWVGTYNQGHS--AEQIAGGI 118

  Fly    63 VTAAHCFFDEE 73
            :....|.:..:
 Frog   119 LAIVRCIYQRQ 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 11/51 (22%)
Tryp_SPc 27..243 CDD:238113 10/50 (20%)
pafah1b3NP_001006715.1 PAF_acetylesterase_like 8..217 CDD:238858 22/76 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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