DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and Sems

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster


Alignment Length:279 Identity:76/279 - (27%)
Similarity:125/279 - (44%) Gaps:48/279 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FLLLLA--------------LDFLSAGQV---NRWEQRIIGGE-----PIGIEQVPWQVSLQYFG 48
            ||.|||              :|.....::   ..::.|:|||.     .:|    .:.|:::||.
  Fly     6 FLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGRVTTNAKLG----GYLVAMRYFN 66

  Fly    49 DHVCGGSIYSENIIVTAAHCFFDEEGNRLDDQGYQVRAGSALTDSNGTLVDVAALIIHEEYAFDL 113
            :.:|||::..|.|::||||||.|    |.:.:.:.|..|.:.....|....|...|...::....
  Fly    67 NFICGGTLIHELIVLTAAHCFED----RAEKEAWSVDGGISRLSEKGIRRQVKRFIKSAQFKMVT 127

  Fly   114 NINDIAIVRLSTPLEFTSKVQPIPLAKTNPYPRSIALVSGWGVSYILNDSTNLYPTH-LQGLALH 177
            ...|:|:|.|:.|: ....:..:.|..|...|.....|||||    :.:..:..|.| |:.:::.
  Fly   128 MNMDVAVVLLNRPM-VGKNIGTLSLCSTALTPGQTMDVSGWG----MTNPDDEGPGHMLRTVSVP 187

  Fly   178 IKSIFSCR-------LFDPSLLCAGTYG-RTACHGDSGGPLVVNKQLVGVVSWGRKGCVSSAF-- 232
            :.....||       ....|:.||...| :.||..|||||||..||:.|:||:| .||.|..:  
  Fly   188 VIEKRICREAYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFG-IGCASRRYPG 251

  Fly   233 -FVSVPYFREWILNAIASI 250
             :..|.|.:.:|:..|.::
  Fly   252 VYTDVHYVKPFIVKGIKAL 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 68/233 (29%)
Tryp_SPc 27..243 CDD:238113 67/232 (29%)
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 68/233 (29%)
Tryp_SPc 44..265 CDD:238113 68/234 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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