DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and Send1

DIOPT Version :10

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:259 Identity:118/259 - (45%)
Similarity:159/259 - (61%) Gaps:28/259 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIESFLLLLALDFLSAGQVN---RWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENII 62
            ||.:.|.||||:..|.:..|.   ...:|||||..:.|..|||||||||:|:|.|||||||:.||
  Fly     1 MFSKCFHLLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTII 65

  Fly    63 VTAAHCFFDEEGNRLDDQGYQVRAGSALTDSNGTLVDVAALIIHEEYAFDLNINDIAIVRLSTPL 127
            :|||||.  :||.|      .:||||:|.||.|.:|.|.|.|||.::......||:|:::||:||
  Fly    66 ITAAHCI--KEGER------SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPL 122

  Fly   128 EFTSKVQPIPLAKTNPYPRSIALVSGWGVSYILNDSTNLYPTHLQGLALHIKSIFSCRL------ 186
            .|:..:|.||||:|:|...|.||.:|||....|     :.|..|||:.:.|:.:..|:|      
  Fly   123 SFSDSIQTIPLAETDPPTSSSALATGWGRGNFL-----IRPRQLQGVEILIRPLIVCKLKYGNGV 182

  Fly   187 FDPSLLCAGTYGRTACHGDSGGPLVVNKQLVGVVSWGRKG---CVSSAFFVSVPYFREWILNAI 247
            |:.. :|||..|:..|:||||||||.|.||||:.|  |.|   |:.|:.:.||..:|.|||:||
  Fly   183 FNED-ICAGRMGKGGCYGDSGGPLVFNGQLVGITS--RTGNIVCLGSSLYASVARYRNWILSAI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 27..243 CDD:238113 103/224 (46%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 104/225 (46%)

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