DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17234 and tmprss4b

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:267 Identity:90/267 - (33%)
Similarity:137/267 - (51%) Gaps:38/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IESFL---------LLLALDFLSAGQVNRWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYS 58
            |:|||         .::::.....|:| ..|.||:||....||..|||||||:...|:||||:.|
Zfish   170 IQSFLSASNKCSSGSVVSVSCSDCGEV-VGEDRIVGGVETSIEHWPWQVSLQFNHRHMCGGSLLS 233

  Fly    59 ENIIVTAAHCFFDEEGNRLDDQGYQVRAG-SALTDSNGTLVDVAALIIHEEYAFDLNINDIAIVR 122
            .:.|::|||||   .|...:...:.|..| :.:.|..|..||:  ::||::|....|..|||:::
Zfish   234 TSWIISAAHCF---TGRTQELSRWTVVLGQTKVMDVVGVSVDM--IVIHKDYNRLTNDFDIAMLK 293

  Fly   123 LSTPLEFTSKVQPIPLAKTNPYPRSIALVSGWGVSYILNDSTNLYPTHLQGLALHI--------K 179
            |:.|::....:.|:.|.......:.:.:|:|||   :|.:...| ||.||..::.:        .
Zfish   294 LTWPVKTGESILPVCLPPHQLAIKDMLVVTGWG---LLKEGGAL-PTVLQKASVPLVNRSECSKP 354

  Fly   180 SIFSCRLFDPSLLCAG-TYGRT-ACHGDSGGPLVV---NKQLVGVVSWGRKGCV---SSAFFVSV 236
            :|:|..: .|.:|||| ..|.. ||.||||||||.   ..||:|:|||| .||.   ....:..|
Zfish   355 TIYSSSI-TPRMLCAGFLQGNVDACQGDSGGPLVYLSSRWQLIGIVSWG-VGCAREGKPGVYADV 417

  Fly   237 PYFREWI 243
            ....:||
Zfish   418 TQLLDWI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 81/233 (35%)
Tryp_SPc 27..243 CDD:238113 80/232 (34%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133 4/8 (50%)
SRCR 105..>175 CDD:278931 3/4 (75%)
Tryp_SPc 201..424 CDD:214473 81/233 (35%)
Tryp_SPc 202..427 CDD:238113 82/234 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.