DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and Elane

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001100237.1 Gene:Elane / 299606 RGDID:1307968 Length:271 Species:Rattus norvegicus


Alignment Length:255 Identity:76/255 - (29%)
Similarity:113/255 - (44%) Gaps:33/255 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLALDFLSAGQVNRWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENIIVTAAHCFFDE 72
            :||||..:.....:    .|:||.|......|:.||||..|.|.||.::.:.|.:::||||.   
  Rat    18 MLLALLLVCPALAS----EIVGGRPAQPHAWPFMVSLQRRGGHFCGATLIARNFVMSAAHCV--- 75

  Fly    73 EGNRLDDQGYQVRAGS---ALTDSNGTLVDVAALIIHEEYAFDLN--INDIAIVRLSTPLEFTSK 132
              |..:.|..||..|:   ...:....:..|..:.   |..||.:  :|||.|::|:......:.
  Rat    76 --NGRNFQSVQVVLGAHDLRRREPTRQIFSVQRIF---ENGFDPSRLLNDIVIIQLNGSATINAN 135

  Fly   133 VQ--PIPLAKTNPYPRSIALVSGWGVSYILNDSTNL-YPTHLQGLALHIKSIFSCRLFDPSLLCA 194
            ||  .:|........|:..:..|||     ...||. .|:.||.|.:.:.:....|..:   :|.
  Rat   136 VQVAELPAQGQGVGNRTPCVAMGWG-----RLGTNRPLPSVLQELNVTVVTNLCRRRVN---VCT 192

  Fly   195 GTYGRTA--CHGDSGGPLVVNKQLVGVVSWGRKGCVSSAF---FVSVPYFREWILNAIAS 249
            ....|.|  |.||||||||.|..:.|:.|:.|.||.|..:   |..|..|.:||.:.|.|
  Rat   193 LVPRRQAGICFGDSGGPLVCNNLVQGIDSFIRGGCGSGFYPDAFAPVAEFADWINSIIRS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 68/229 (30%)
Tryp_SPc 27..243 CDD:238113 68/228 (30%)
ElaneNP_001100237.1 Tryp_SPc 32..246 CDD:214473 68/229 (30%)
Tryp_SPc 33..249 CDD:238113 70/231 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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