DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and Gzmm

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_476531.1 Gene:Gzmm / 29252 RGDID:620022 Length:264 Species:Rattus norvegicus


Alignment Length:274 Identity:83/274 - (30%)
Similarity:118/274 - (43%) Gaps:55/274 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SFLLLLALDFL-SAGQVNRWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENIIVTAAHC 68
            |.||||||..| :.|  ||:|.:||||........|:.||||....|||||.:..:..::|||||
  Rat     6 SLLLLLALKTLWAVG--NRFEAQIIGGREAVPHSRPYMVSLQNTKSHVCGGVLVHQKWVLTAAHC 68

  Fly    69 FFDEEGNRLDDQGYQVRAGSAL-----TDSNGTLVDVAALIIHEEYAFDLNINDIAIVRLSTPLE 128
                    |.:...|::....|     ....|....:...|.|..|..... ||:|:::|...::
  Rat    69 --------LSEPLQQLKLVFGLHSLHDPQDPGLTFYIKQAIKHPGYNLKYE-NDLALLKLDGRVK 124

  Fly   129 FTSKVQPIPL---AKTNPYPRSIALVSGWGVSYILNDSTNLYPTHLQG-LALHIKSIFSCRLFD- 188
            .:..|:|:.|   .:..|...|....:|||:            ||.:| ||..::.: ..||.| 
  Rat   125 PSKNVKPLALPRKPRDKPAEGSRCSTAGWGI------------THQRGQLAKSLQEL-DLRLLDT 176

  Fly   189 --------------PSLLC--AGTYGRTACHGDSGGPLVVNKQLV-GVVSWGRKGCV---SSAFF 233
                          .|:||  ||..|:..|.||||||||..|..| |::|:..|.|.   .....
  Rat   177 RMCNNSRFWNGVLTDSMLCLKAGAKGQAPCKGDSGGPLVCGKGKVDGILSFSSKNCTDIFKPTVA 241

  Fly   234 VSVPYFREWILNAI 247
            .:|..:..||...|
  Rat   242 TAVAPYSSWIRKVI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 68/246 (28%)
Tryp_SPc 27..243 CDD:238113 68/245 (28%)
GzmmNP_476531.1 Tryp_SPc 27..254 CDD:238113 70/248 (28%)
Trypsin 27..251 CDD:278516 68/245 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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