DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17234 and F11

DIOPT Version :9

Sequence 1:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_006253206.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:245 Identity:76/245 - (31%)
Similarity:111/245 - (45%) Gaps:31/245 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENIIVTAAHCFFDEEGNR-LDDQGYQVRAGSA 89
            |:.||......:.||||:|.....|:|||||.....|:||||||...|..: |...|..|.....
  Rat   387 RVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTLRVYGGIVNQSEI 451

  Fly    90 LTDSNGTLVDVAALIIHEEYAFDLNINDIAIVRLSTPLEFTSKVQPIPLAKTNPYPRSI----AL 150
            ..|:  |...|..:|||::|....:..|||:::|...:.:|...:||.|....  .|::    ..
  Rat   452 NEDT--TFFRVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICLPSKG--DRNVVHTECW 512

  Fly   151 VSGWGVSYILNDSTNLYPTHLQGLALHIKSIFSCRL------FDPSLLCAGTY---GRTACHGDS 206
            |:|||.:    .|.:...:.||...:.:.|...|:.      ....::||| |   |:..|.|||
  Rat   513 VTGWGYT----KSRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICAG-YKEGGKDTCKGDS 572

  Fly   207 GGPLVVNK----QLVGVVSWGRKGCVSS---AFFVSVPYFREWILNAIAS 249
            ||||....    .|||:.||| :||...   ..:.:|..:.:|||....|
  Rat   573 GGPLSCKHNGVWHLVGITSWG-EGCGQKERPGVYTNVAKYVDWILEKTQS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 72/237 (30%)
Tryp_SPc 27..243 CDD:238113 71/236 (30%)
F11XP_006253206.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 387..615 CDD:214473 72/237 (30%)
Tryp_SPc 388..615 CDD:238113 71/236 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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