DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and LOC560023

DIOPT Version :9

Sequence 1:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_021325702.1 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:250 Identity:92/250 - (36%)
Similarity:132/250 - (52%) Gaps:30/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WIFLAFSVTVVSSNWIPERIVGGDLITILSVPWQASILRLGRFH-CGAAIYSEDIVITAAHC--- 65
            |:||..:|.|..:  ..:||:||..:...|:.:|.| |::.|.| ||..:.....|:|||||   
Zfish    27 WVFLVLAVMVRDA--FSQRIIGGQEVVPYSIKYQVS-LQVDRKHFCGGTLIQPQWVLTAAHCWRP 88

  Fly    66 -------LTDRETEFLSVRVGSSFTFFGGQVVRVSSVLLHEEYD-QSWSNDIAVMRLQSKLRLGS 122
                   |::..   |:|..|..      ||..|:.|..|..|: ::::|||.:::|.:..::.:
Zfish    89 ASVIQVVLSEHN---LAVEEGFE------QVCTVAKVFSHVAYNPKTFNNDIMIIKLTAPAQINA 144

  Fly   123 AV--SVIPLADTPP-ASGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMI 184
            .|  :::|.||||. |.||..||||||.......|...||.| ||:.....|:..|..::..:||
Zfish   145 YVQPALLPTADTPELAGGSSCTVSGWGVTRLYNFYLSPILRA-VDVEIFSSCQLYYYYRVNDNMI 208

  Fly   185 CAAA--PGKDACSGDSGGPLVSGNKLVGIVSFGKECAHPEYPGVYANVAELKPWI 237
            ||.:  .|||:|.|||||||:....|.||||:|..||.|.|||||..|.....||
Zfish   209 CAGSRFGGKDSCQGDSGGPLICDGYLEGIVSWGIGCALPYYPGVYTKVRNYNRWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 85/230 (37%)
Tryp_SPc 24..237 CDD:238113 84/229 (37%)
LOC560023XP_021325702.1 Tryp_SPc 43..263 CDD:214473 85/230 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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