DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and st14

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_685356.5 Gene:st14 / 557248 ZFINID:ZDB-GENE-140106-74 Length:841 Species:Danio rerio


Alignment Length:237 Identity:76/237 - (32%)
Similarity:114/237 - (48%) Gaps:25/237 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFH-CGAAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFG 86
            |||||....:...|||.|:....:.| |||:|.|...::.||||....:.   |.::.||:..:.
Zfish   602 RIVGGQNADVGEWPWQVSLHFKTQGHACGASIISNKWLLCAAHCFIQPDP---SYKMTSSWITYS 663

  Fly    87 G-----------QVVRVSSVLLHEEY-DQSWSNDIAVMRLQSKLRLGSAVSVIPLADTPP--ASG 137
            |           |:..:.:::.|..| |.:...||:::.|...|...:.|..|.|..|..  .:|
Zfish   664 GLRDQNTHDKSVQMRDLKTIITHPNYNDLTNDYDISLLELSQPLNFSNTVHPICLPATSHVFTAG 728

  Fly   138 SPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAA--APGKDACSGDSGG 200
            |...|:|||.:....:....:..|.|.:::...|......::|..|:|:.  :.|.|||.|||||
Zfish   729 SSCFVTGWGTLREGGSAAQILQKAEVKVINDTVCNMVTEGQVTSRMMCSGYLSGGVDACQGDSGG 793

  Fly   201 PLV---SGNK--LVGIVSFGKECAHPEYPGVYANVAELKPWI 237
            |||   .|.|  ..||||:|:.||....||||..|.:|:.||
Zfish   794 PLVCLSEGGKWFQAGIVSWGEGCARRNKPGVYTRVTKLREWI 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 73/234 (31%)
st14XP_685356.5 SEA 78..175 CDD:460188
CUB 208..322 CDD:238001
CUB 331..437 CDD:238001
LDLa 445..477 CDD:238060
LDLa 479..513 CDD:238060
LDLa 515..549 CDD:238060
LDLa 556..591 CDD:238060
Tryp_SPc 603..838 CDD:238113 75/236 (32%)
Blue background indicates that the domain is not in the aligned region.

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