DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and LOC548809

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 XenbaseID:XB-GENE-29098979 Length:334 Species:Xenopus tropicalis


Alignment Length:271 Identity:83/271 - (30%)
Similarity:111/271 - (40%) Gaps:64/271 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SVTVVSSNWIPERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRET---- 71
            |..:..|..:..|||||...|..:.|||.|:...|...||.::.|...::|||||.....|    
 Frog    45 SPRICGSPLVSSRIVGGTDATNGAWPWQISLRYKGSHICGGSVISNQWIMTAAHCFEYSRTPSDY 109

  Fly    72 ---------------EFLS----VRVGSSFTFFGGQVVRVSSVLLHEEYDQSWSNDIAVMRLQSK 117
                           |.||    |.|..|||..||                  ..|||:::|.|.
 Frog   110 QVLLGAYQLSVASASELLSSVARVIVNPSFTIPGG------------------PGDIALLKLTSP 156

  Fly   118 LRLGSAVSVIPLADTPPAS----GSPATVSGWGAIGFKKN--YPMSILSASVDIVDQDQCRRSYG 176
              :.....::|:.....||    |....|:|||.||....  ||.::......::....|.:.|.
 Frog   157 --VAYTEYILPVCVPSSASGFYEGMQCWVTGWGNIGSAVTLPYPQTLQQVMTPLISWSTCNQMYH 219

  Fly   177 RK---------ITKDMICA--AAPGKDACSGDSGGPLVSGNK----LVGIVSFGKECAHPEYPGV 226
            .:         :.||.|||  ||..||:|.||||||||...:    .:||||:|..||....|||
 Frog   220 VQSGISSNIAIVPKDQICAGYAAGQKDSCQGDSGGPLVCQLQGVWYQIGIVSWGDGCAQASRPGV 284

  Fly   227 YANVAELKPWI 237
            |..|...|.|:
 Frog   285 YTLVPNFKSWL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 79/256 (31%)
LOC548809NP_001016055.2 Tryp_SPc 58..297 CDD:238113 80/258 (31%)

Return to query results.
Submit another query.