DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and prtn3

DIOPT Version :9

Sequence 1:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:227 Identity:64/227 - (28%)
Similarity:107/227 - (47%) Gaps:16/227 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFG- 86
            :||||...|..|.|:.||:...||..||.::.:...::|||||:.:..:..::|.:|:...... 
 Frog    25 QIVGGREATPNSHPYIASLQLRGRHFCGGSLIAPQFLMTAAHCMENTASNLVTVVLGAHSLRANE 89

  Fly    87 --GQVVRVSSVLLHEEYDQSWSNDIAVMRLQSKLRLGSAVSVI--PLADTPPASGSPATVSGWGA 147
              .|..||:.|..:.....:..|||.:::|...:.|...|.|:  |.|:....:|:....:|||.
 Frog    90 ATKQRFRVNQVFENGFNPLTLQNDIVILKLDRPVSLNGKVQVVSLPSANEDVPAGTQCVTAGWGR 154

  Fly   148 IGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAAAPGKDA--CSGDSGGPLVSGNKLVG 210
            :..:...|..:...:|.:..|:.||        .:.||.....:.|  |.||||||||....:.|
 Frog   155 LSTEGQIPDRLQELNVTVTRQNLCR--------PNNICTGVFMQQAGICFGDSGGPLVCNGVIQG 211

  Fly   211 IVSF-GKECAHPEYPGVYANVAELKPWILGAI 241
            |.|| .:.|.:...|..::.|:..:.:|..||
 Frog   212 ITSFIIRSCGNGVTPDFFSRVSLFRRFIDDAI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 61/221 (28%)
Tryp_SPc 24..237 CDD:238113 61/220 (28%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 62/222 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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