DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and prss3

DIOPT Version :9

Sequence 1:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001004941.1 Gene:prss3 / 448342 XenbaseID:XB-GENE-6372192 Length:249 Species:Xenopus tropicalis


Alignment Length:231 Identity:80/231 - (34%)
Similarity:119/231 - (51%) Gaps:16/231 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVG------SS 81
            |||||......|.|||..:...|.|.||.::.:...:::||||..  ..:::...:|      :.
 Frog    22 RIVGGYECAPHSKPWQVHLNYKGSFFCGGSLIAPRWIVSAAHCYL--LPKYVVAHIGMHDVSKAE 84

  Fly    82 FTFFGGQVVRVSSVLLHEEYDQS-WSNDIAVMRLQSKLRLGSAVSVIPLADTPPASGSPATVSGW 145
            .|.   |:::|.....|.:|:.| ..|||.:::|....:....|..||||.:.|..|:...|||:
 Frog    85 GTV---QIIQVEKSFQHYKYNSSNIDNDIMLIKLAEPAQFNHHVQPIPLAHSCPMKGTRCVVSGY 146

  Fly   146 GAI--GFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAA--APGKDACSGDSGGPLVSGN 206
            |.:  ||...:|..:....:.::.:|.|:.|||..||.:|.||.  ..|||:|.||||||||...
 Frog   147 GNMRPGFFGEFPDRLQCLDLPVLPEDSCKSSYGDDITNNMFCAGFQEGGKDSCQGDSGGPLVCDG 211

  Fly   207 KLVGIVSFGKECAHPEYPGVYANVAELKPWILGAIE 242
            :|.|:||:|.|||...|||||..|.....|:...:|
 Frog   212 ELFGVVSWGHECAKKGYPGVYTKVCHYIDWVNDIME 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 78/224 (35%)
Tryp_SPc 24..237 CDD:238113 77/223 (35%)
prss3NP_001004941.1 Tryp_SPc 23..245 CDD:238113 78/226 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.