DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and CG11842

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:268 Identity:63/268 - (23%)
Similarity:96/268 - (35%) Gaps:82/268 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IVGGDLITILSVPWQASILRLG--------RFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVG- 79
            |:||........|..|   |||        .:.||..:.|:..|:|||||....:......|:| 
  Fly    73 IIGGGPAVPKEFPHAA---RLGHKDENGEVEWFCGGTLISDRHVLTAAHCHYSPQGSVNIARLGD 134

  Fly    80 ------------SSFTFFGGQVVRVSSVLLHEEYD-QSWSNDIAVMRLQSKLRLG--SAVSVIPL 129
                        ..|.        |.....|.|:. .:..|||:|:||...:...  ...:.:|.
  Fly   135 LEFDTNNDDADPEDFD--------VKDFTAHPEFSYPAIYNDISVVRLSRPVTFNDYKHPACLPF 191

  Fly   130 ADTPPASGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRR-------SYGR--KITKD--- 182
            .|  ...|:.....|||               .::||.:.:.::       :||.  :||.|   
  Fly   192 DD--GRLGTSFIAIGWG---------------QLEIVPRTENKKLQKVKLYNYGTRCRITADRND 239

  Fly   183 ----------MICAAA-PGKDACSGDSGGPLVSGN-------KLVGIVSFGKECAHPEYPGVYAN 229
                      .:|..: ..||.|:||||||::..:       .::||.|.|..|..|:.|.:|..
  Fly   240 ELPEGYNATTQLCIGSNEHKDTCNGDSGGPVLIYHMDYPCMYHVMGITSIGVACDTPDLPAMYTR 304

  Fly   230 VAELKPWI 237
            |.....||
  Fly   305 VHFYLDWI 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 61/266 (23%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 63/268 (24%)

Return to query results.
Submit another query.