DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and snk

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:216 Identity:69/216 - (31%)
Similarity:104/216 - (48%) Gaps:29/216 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGS---SFTFFGGQVVRVSSVLLHEEYDQS-WS 106
            ::.||.|:.||..|:|||||.|........||:|:   :.|....|.:::..::||.:|..| :.
  Fly   217 KWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYY 281

  Fly   107 NDIAVMRLQSKLRLGSAVSVIPLADTPPASGSPATVSGWGA---IGFKKNYPMSILSASVDIVDQ 168
            :|||:::|..:::....|....|...|.........:|||.   :|.|.|   ::....:|:|.|
  Fly   282 HDIALLKLTRRVKFSEQVRPACLWQLPELQIPTVVAAGWGRTEFLGAKSN---ALRQVDLDVVPQ 343

  Fly   169 DQCRRSY------GRKITKDMICAA--APGKDACSGDSGGPL---------VSGNKLVGIVSFGK 216
            ..|::.|      .|.|.:...||.  ..|:|.|.||||||:         |:  .:|||.||||
  Fly   344 MTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVA--FVVGITSFGK 406

  Fly   217 ECAHPEYPGVYANVAELKPWI 237
            .||.|..||||..:.....||
  Fly   407 FCAAPNAPGVYTRLYSYLDWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 67/214 (31%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 69/216 (32%)
Blue background indicates that the domain is not in the aligned region.

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