DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and LOC3290448

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_321900.4 Gene:LOC3290448 / 3290448 VectorBaseID:AGAMI1_012340 Length:271 Species:Anopheles gambiae


Alignment Length:217 Identity:73/217 - (33%)
Similarity:107/217 - (49%) Gaps:12/217 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFGG 87
            |||||..:.|...|:|.|:...|...|||:..:..:.:||.||........|:||.|||....||
Mosquito    34 RIVGGWEVYIGQFPYQLSLEYDGYHICGASAVAPRLALTAGHCCIGTNETDLTVRGGSSTLEEGG 98

  Fly    88 QVVRVSSVLLHEEYDQS-WSNDIAVMRL----QSKLRLGSAVSVIPLADTPPASGSPATVSGWGA 147
            .|..|..:::|.:||.| ...|:.|:|:    |:|..:|   .:.|.:.....||..|.|:||||
Mosquito    99 IVFPVKKLVIHPDYDDSNLDFDVCVLRIGGTFQNKPNIG---IIQPTSSGTIPSGELAIVTGWGA 160

  Fly   148 IGFKKNYPMSILSASVDIVDQDQCRRSYGRKITK--DMICAAAPGKDACSGDSGGPLVSGNKLVG 210
            .....|:..::.|.:|.:.....|.......:|.  .|:||.:.|:..|.||||||||...:.:|
Mosquito   161 TESNGNFVPNLRSLAVKVWSTKNCTDQAANYMTSSGSMMCAGSVGRSFCVGDSGGPLVYDQRQIG 225

  Fly   211 IVSF-GKECAHPEYPGVYANVA 231
            |||| ..||.... |.:|..::
Mosquito   226 IVSFLINECGGTA-PAIYTRLS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 72/216 (33%)
LOC3290448XP_321900.4 None

Return to query results.
Submit another query.