DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and spirit

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_572492.1 Gene:spirit / 31797 FlyBaseID:FBgn0030051 Length:393 Species:Drosophila melanogaster


Alignment Length:258 Identity:64/258 - (24%)
Similarity:112/258 - (43%) Gaps:49/258 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IVGG------DLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRV-GSS 81
            :|||      :...:.::.|:::..:...:.||.|:.:.:.|:|||||..........||: |.:
  Fly   132 VVGGMPTRPREFPFMAALGWRSNFDQRIYYRCGGALIANNFVLTAAHCADLGGEPPSQVRLGGDN 196

  Fly    82 FTFFGGQVVRVSSVLLHEEYDQSWS-NDIAVMRLQSKLRLGSAVSVIPLADTPP--------ASG 137
            .|...|:.:.:..|::|.:|..|.: ||||::.|::..:          .:..|        .:.
  Fly   197 LTLTEGEDISIRRVIIHPDYSASTAYNDIALLELETAAK----------PELKPTCIWTQKEVTN 251

  Fly   138 SPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAAAPG-----------K 191
            :..|..|:|...|.......:|...:..|..::|:..|    .||.:.....|           :
  Fly   252 TLVTAIGYGQTSFAGLSSAQLLKVPLKSVSNEECQHHY----QKDQLAQGVLGTQMCAGDITGER 312

  Fly   192 DACSGDSGGPLVSGNKL----VGIVSFGKECAHPEYPGVYANVAELKPWILGAI---ERITKS 247
            |.|.|||||||:..:.|    |||.|.|:.||... |.||..|:....||.|.:   :::|.:
  Fly   313 DTCQGDSGGPLLMQDGLLGYVVGITSLGQGCASGP-PSVYTRVSSFVDWIEGIVWPAQQVTNA 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 60/243 (25%)
spiritNP_572492.1 CLIP 51..98 CDD:197829
Tryp_SPc 132..364 CDD:238113 62/246 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.