DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and Ovch2

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:246 Identity:70/246 - (28%)
Similarity:117/246 - (47%) Gaps:33/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEF-LSVRVGS---SFT 83
            |||||..:...|.|||.|:.:..:..||..|.|...|||||||:.:|.... |:|..|.   |..
  Rat    51 RIVGGSQVEKGSYPWQVSLKQKQKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHDLSQA 115

  Fly    84 FFGGQVVRVSSVLLHEEYD--QSWSNDIAVMRLQSKLRLGSAVSVIPLADTPPA----SGSPATV 142
            ..|.|.:.:.::::|.::.  :..:.|||::::....:.|..|..:.|.:  |.    :|...|.
  Rat   116 EPGEQTLAIETIIIHPQFSTKKPMNYDIALLKMVGTFQFGQFVRPVCLPE--PGEQFNAGYICTT 178

  Fly   143 SGWGAIGFKKNYPMSILSASVDIVDQDQCRR---SYGRKIT-KDMICAAAP--GKDACSGDSGGP 201
            :|||.:....:.|..:...::.|:..::|..   :....|| |..:|..:|  |:|||.|||||.
  Rat   179 AGWGRLSEGGSLPQVLQQVNLPILTHEECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGDSGGS 243

  Fly   202 LVSGNK-----LVGIVSFGKECA----------HPEYPGVYANVAELKPWI 237
            |:..|:     |.|:.|:|..|.          ....||::.::..:.|||
  Rat   244 LMCQNRKGAWTLAGVTSWGLGCGRSWRNNARKKEQGSPGIFTDLRRVLPWI 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 67/243 (28%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 69/245 (28%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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