DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and Klk12

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001100978.2 Gene:Klk12 / 308564 RGDID:1308975 Length:247 Species:Rattus norvegicus


Alignment Length:235 Identity:73/235 - (31%)
Similarity:105/235 - (44%) Gaps:33/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ERIVGGDLITILSVPWQASILRLGRFH-----CGAAIYSEDIVITAAHC-------LTDRETEFL 74
            |:|..|......|.|||     :|.||     ||..:.....|:|||||       |.:.....|
  Rat    20 EKIYNGVECVKNSQPWQ-----VGLFHGKYLRCGGVLVDRKWVLTAAHCSGKYMVRLGEHSLSKL 79

  Fly    75 SVRVGSSFTFFGGQVVRVSSVLLHEEYDQSWSN---DIAVMRLQSKLRLGSAVSVIPLADTPPAS 136
            .:......|.|.         :.|..|..::.|   |:.::||...:.|..||..:.|..:...:
  Rat    80 DLTEQLRLTTFS---------ITHPSYHGAYQNHEHDLRLLRLNRPISLTYAVRPVALPSSCAPT 135

  Fly   137 GSPATVSGWGAIGFKKN-YPMSILSASVDIVDQDQCRRSYGRKITKDMICAAA-PGKDACSGDSG 199
            |:...:||||......: :|..:....:.||..:.||..:..::|::|:||.. .|||||.||||
  Rat   136 GAKCHISGWGTTNKPWDPFPDRLQCLDLSIVSNETCRAVFPGRVTENMLCAGGEAGKDACQGDSG 200

  Fly   200 GPLVSGNKLVGIVSFGK--ECAHPEYPGVYANVAELKPWI 237
            ||||.|..|.|:||:|.  .|.....||||..|.:...||
  Rat   201 GPLVCGGVLQGLVSWGSVGPCGQKGIPGVYTKVCKYTDWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 70/231 (30%)
Klk12NP_001100978.2 Tryp_SPc 21..240 CDD:214473 70/232 (30%)

Return to query results.
Submit another query.