DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and Tmprss11e

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001406557.1 Gene:Tmprss11e / 305265 RGDID:1561698 Length:423 Species:Rattus norvegicus


Alignment Length:239 Identity:83/239 - (34%)
Similarity:117/239 - (48%) Gaps:36/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFGG 87
            |||||........|||:|:...|...|||.:.|...:::||||       |.:.:..|.:|...|
  Rat   191 RIVGGTSAEEGEWPWQSSLQWDGSHRCGATLISNTWLVSAAHC-------FRTHKDPSRWTASFG 248

  Fly    88 QVVR-------VSSVLLHEEYD-QSWSNDIAVMRLQSKLRLGSAVSVIPLADT----PPASGSPA 140
            ..::       :..:::||:|: .|...|||::.|...:...:||..:.|.|.    .|  |...
  Rat   249 ATLQPPKLTTGIRRIIVHEKYNYPSHDYDIALVELSRPVPCTNAVHKVCLPDANHEFQP--GQRM 311

  Fly   141 TVSGWGAI---GFKKNYPMSILSASVDIVDQDQCRR--SYGRKITKDMICAA--APGKDACSGDS 198
            .|:|:||:   ||.:||   :....||.:|...|.|  ||...||..|:||.  ...||||.|||
  Rat   312 FVTGFGALRNDGFAQNY---LRQVQVDYIDTQTCNRPQSYNGAITPRMLCAGFLKGEKDACQGDS 373

  Fly   199 GGPLVSGN-----KLVGIVSFGKECAHPEYPGVYANVAELKPWI 237
            |||||:.:     .|.|:||:|.||..|..||||..|...:.||
  Rat   374 GGPLVTPDVRDVWYLAGVVSWGDECGQPNKPGVYTRVTAFRDWI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 80/236 (34%)
Tmprss11eNP_001406557.1 SEA 50..146 CDD:460188
Tryp_SPc 192..420 CDD:238113 82/238 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.