DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and Gzmm

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:213 Identity:53/213 - (24%)
Similarity:90/213 - (42%) Gaps:26/213 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVQW---IFLAFSVTVVSSNWIPERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITA 62
            |.|:|   :.||........|....:|:||......|.|:..|:.......||..:..:..|:||
  Rat     1 MEVRWSLLLLLALKTLWAVGNRFEAQIIGGREAVPHSRPYMVSLQNTKSHVCGGVLVHQKWVLTA 65

  Fly    63 AHCLTDRETEFLSVRVG---------SSFTFFGGQVVRVSSVLLHEEYDQSWSNDIAVMRLQSKL 118
            ||||:: ..:.|.:..|         ...||:..|.::      |..|:..:.||:|:::|..::
  Rat    66 AHCLSE-PLQQLKLVFGLHSLHDPQDPGLTFYIKQAIK------HPGYNLKYENDLALLKLDGRV 123

  Fly   119 RLGSAVSVIPLADTP---PASGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRS--YGRK 178
            :....|..:.|...|   ||.||..:.:|||....:.....|:....:.::|...|..|  :...
  Rat   124 KPSKNVKPLALPRKPRDKPAEGSRCSTAGWGITHQRGQLAKSLQELDLRLLDTRMCNNSRFWNGV 188

  Fly   179 ITKDMIC--AAAPGKDAC 194
            :|..|:|  |.|.|:..|
  Rat   189 LTDSMLCLKAGAKGQAPC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 47/187 (25%)
GzmmXP_063119183.1 None

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