DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and F11

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:257 Identity:84/257 - (32%)
Similarity:123/257 - (47%) Gaps:36/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VSSNWIPERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRET-EFLSV-- 76
            |.:..|..|:.||........|||.::.......||.:|.....::|||||.:..|| :.|.|  
  Rat   379 VCTTKIRPRVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTLRVYG 443

  Fly    77 ------RVGSSFTFFGGQVVRVSSVLLHEEYDQSWSN-DIAVMRLQSKLRLGSAVSVIPLADTPP 134
                  .:....|||     ||..:::|::|..:.|. |||:::|:..:........|.|    |
  Rat   444 GIVNQSEINEDTTFF-----RVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICL----P 499

  Fly   135 ASG------SPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGR-KITKDMICAA--APG 190
            :.|      :...|:|||....:.....::..|.|.:|..::|:..|.: |||..:|||.  ..|
  Rat   500 SKGDRNVVHTECWVTGWGYTKSRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICAGYKEGG 564

  Fly   191 KDACSGDSGGPLVSGNK----LVGIVSFGKECAHPEYPGVYANVAELKPWILGAIERITKSE 248
            ||.|.|||||||...:.    ||||.|:|:.|...|.||||.|||:...|||   |: |:||
  Rat   565 KDTCKGDSGGPLSCKHNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWIL---EK-TQSE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 74/235 (31%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 74/235 (31%)
Blue background indicates that the domain is not in the aligned region.

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