DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and 1810009J06Rikl

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:1810009J06Rikl / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:246 Identity:87/246 - (35%)
Similarity:128/246 - (52%) Gaps:24/246 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IFLAFSVTVVSSNWIP----ERIVGGDLITILSVPWQASILRLGRFH-CGAAIYSEDIVITAAHC 65
            ||.||....|:   :|    ::||||.......||:|.| |..|..| ||.::.|:..|::||||
  Rat     5 IFFAFLGAAVA---LPVNDDDKIVGGYTCPKHLVPYQVS-LHDGISHQCGGSLISDQWVLSAAHC 65

  Fly    66 LTDRETEFLSVRVG--SSFTFFGG-QVVRVSSVLLHEEYDQ-SWSNDIAVMRLQSKLRLGSAVSV 126
            ...:    |.||:|  :.....|| |.:....::.|.||:: :..|||.:::|:|...|.|.||.
  Rat    66 YKRK----LQVRLGEHNIHVLEGGEQFIDAEKIIRHPEYNKDTLDNDIMLIKLKSPAVLNSQVST 126

  Fly   127 IPLADTPPASGSPATVSGWG---AIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAA- 187
            :.|..:..::.:...|||||   :||.|  ||..:......::....|::||..:||.:|.|.. 
  Rat   127 VSLPRSCASTDAQCLVSGWGNTVSIGGK--YPALLQCLEAPVLSASSCKKSYPGQITSNMFCLGF 189

  Fly   188 -APGKDACSGDSGGPLVSGNKLVGIVSFGKECAHPEYPGVYANVAELKPWI 237
             ..|||:|.||||||:|...::.||||:|..||....||||..|.....||
  Rat   190 LEGGKDSCDGDSGGPVVCNGEIQGIVSWGSVCAMRGKPGVYTKVCNYLSWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 79/222 (36%)
1810009J06RiklNP_775423.1 Tryp_SPc 24..243 CDD:238113 81/224 (36%)

Return to query results.
Submit another query.