DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and Proc

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_008770240.3 Gene:Proc / 25268 RGDID:3411 Length:500 Species:Rattus norvegicus


Alignment Length:244 Identity:76/244 - (31%)
Similarity:113/244 - (46%) Gaps:39/244 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASIL-RLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFG 86
            |||.|.|......||||.:| ...:..||..:.....|:||||||  ..::.|:||:|..     
  Rat   251 RIVNGTLTKQGDSPWQAILLDSKKKLACGGVLIHTSWVLTAAHCL--ESSKKLTVRLGEY----- 308

  Fly    87 GQVVR---------VSSVLLHEEYDQSWS-NDIAVMRLQSKLRLGSAVSVIP-------LADTPP 134
             .:.|         :..||:|..|.:|.| ||||::||.....|..  :::|       ||....
  Rat   309 -DLRRRDPWELDLDIKEVLVHPNYTRSNSDNDIALLRLSQPATLSK--TIVPICLPNSGLAQELS 370

  Fly   135 ASGSPATVSGWGAIGFK-----KNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAAAPG--KD 192
            .:|....|:|||....|     :|....:....:.:..::.|.:.....::::|:||...|  :|
  Rat   371 QAGQETVVTGWGYQSDKVKDGRRNRTFILTFIRIPLAARNDCMQVMNNVVSENMLCAGIIGDTRD 435

  Fly   193 ACSGDSGGPLVSGNK----LVGIVSFGKECAHPEYPGVYANVAELKPWI 237
            ||.||||||:|...:    |||:||:|:.|.|....|||..|.....||
  Rat   436 ACDGDSGGPMVVFFRGTWFLVGLVSWGEGCGHLNNYGVYTKVGSYLKWI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 73/241 (30%)
ProcXP_008770240.3 GLA 65..125 CDD:214503
EGF_CA 126..170 CDD:238011
FXa_inhibition 178..213 CDD:464251
Tryp_SPc 252..486 CDD:238113 75/243 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.