DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and CG30088

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:262 Identity:76/262 - (29%)
Similarity:112/262 - (42%) Gaps:48/262 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FLAFSVTVVSSNWIPERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRET 71
            ||..|..|...:.:..|||.|....:.|.|:.|.:......|||..|.|...::|||||:    .
  Fly    28 FLIPSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCM----R 88

  Fly    72 EFLSVRVGSSFTFFGGQVVR-----------------VSSVLLHEEYDQSWSNDIAVMRLQSKLR 119
            .:|.||:|..      .:.|                 :.....::.:|:..:||||:::|...:|
  Fly    89 PYLKVRLGEH------DITRNPDCQGGSCSPPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIR 147

  Fly   120 LGSAVSVIPLADTPPASGS--PATVSGWGAIGFKKNYPMSILSASV-DIVDQDQCRRSYGRKITK 181
            ....:..|.|...|.|:.:  .....|||..  :.|:..::|..:| ...|...||......||.
  Fly   148 FNVHIQPICLILNPAAAPNVHEFQAFGWGQT--ETNHSANVLQTTVLTRYDNRHCRSVLSMPITI 210

  Fly   182 DMICAAAPGKDACSGDSGGPLVSGNKL----------VGIVSFGKE-CAHPEYPGVYANVAELKP 235
            :.:|....|.|.||||||||||:  |:          :||||||.: |   :.||||..|.....
  Fly   211 NQLCVGFQGSDTCSGDSGGPLVT--KVNYDGVWRYLQLGIVSFGDDKC---QSPGVYTYVPNYIR 270

  Fly   236 WI 237
            ||
  Fly   271 WI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 69/243 (28%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 71/245 (29%)

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