DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and Prtn3

DIOPT Version :9

Sequence 1:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_035308.2 Gene:Prtn3 / 19152 MGIID:893580 Length:254 Species:Mus musculus


Alignment Length:235 Identity:70/235 - (29%)
Similarity:106/235 - (45%) Gaps:38/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRF----HCGAAIYSEDIVITAAHCLTDRETEFLSVRVGS--- 80
            :||||......|.|:.|| |:|.||    .||..:.....|:||||||.|...:.::|.:|:   
Mouse    29 KIVGGHEARPHSRPYVAS-LQLSRFPGSHFCGGTLIHPRFVLTAAHCLQDISWQLVTVVLGAHDL 92

  Fly    81 --------SFTFFGGQVVRVSSVLLHEEYDQSWSNDIAVMRLQSKLRLGSAVSV--IPLADTPPA 135
                    .||        :|.|..:....:...||:.:::|.....||..|:|  :|..|...:
Mouse    93 LSSEPEQQKFT--------ISQVFQNNYNPEENLNDVLLLQLNRTASLGKEVAVASLPQQDQTLS 149

  Fly   136 SGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAAAPGKDA--CSGDS 198
            .|:.....|||.:|.:...|..:...:|.:| ...||        :..:|...|.:.|  |.|||
Mouse   150 QGTQCLAMGWGRLGTQAPTPRVLQELNVTVV-TFLCR--------EHNVCTLVPRRAAGICFGDS 205

  Fly   199 GGPLVSGNKLVGIVSFG-KECAHPEYPGVYANVAELKPWI 237
            ||||:....|.|:.||. :|||..::|..:|.|:....||
Mouse   206 GGPLICNGILHGVDSFVIRECASLQFPDFFARVSMYVDWI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 68/233 (29%)
Tryp_SPc 24..237 CDD:238113 68/232 (29%)
Prtn3NP_035308.2 Tryp_SPc 29..245 CDD:214473 68/233 (29%)
Tryp_SPc 30..248 CDD:238113 70/234 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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