DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17239 and LOC102554637

DIOPT Version :9

Sequence 1:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_017448472.2 Gene:LOC102554637 / 102554637 RGDID:7618053 Length:246 Species:Rattus norvegicus


Alignment Length:227 Identity:81/227 - (35%)
Similarity:124/227 - (54%) Gaps:12/227 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGS-SFTFF 85
            ::||||......|||:|.| |..|..:||.::.::..|::||||...|    :.||:|. :....
  Rat    22 DKIVGGYTCQEHSVPYQVS-LNSGYHYCGGSLINDQWVVSAAHCYKSR----IQVRLGEHNINVL 81

  Fly    86 GG--QVVRVSSVLLHEEYD-QSWSNDIAVMRLQSKLRLGSAVSVIPLADTPPASGSPATVSGWG- 146
            .|  |.|..:.::.|..:| ::.:|||.:::|.|.::|.:.|:.:.|..:...:|:...:|||| 
  Rat    82 EGDEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGN 146

  Fly   147 AIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMICAA--APGKDACSGDSGGPLVSGNKLV 209
            .:.|..|.|..:......::.|..|..||..|||.:|:||.  ..|||:|.||||||:|...:|.
  Rat   147 TLSFGVNDPDLLQCLDAPLLPQADCEASYPGKITNNMVCAGFLEGGKDSCQGDSGGPVVCNGELQ 211

  Fly   210 GIVSFGKECAHPEYPGVYANVAELKPWILGAI 241
            ||||:|..||.|:.||||..|.....||...|
  Rat   212 GIVSWGYGCALPDNPGVYTKVCNYVDWIQDTI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 78/220 (35%)
Tryp_SPc 24..237 CDD:238113 78/219 (36%)
LOC102554637XP_017448472.2 Tryp_SPc 24..242 CDD:238113 80/222 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.