DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17239 and tmprss6

DIOPT Version :10

Sequence 1:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:250 Identity:88/250 - (35%)
Similarity:122/250 - (48%) Gaps:41/250 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFGG 87
            |:|||........|||||:...|...||..:.::..::|||||.|..  .:.|..|   :|.:.|
 Frog   570 RLVGGTQAQEGEWPWQASLQVRGEHICGGTLVADQWILTAAHCFTPE--SYASPEV---WTVYLG 629

  Fly    88 QV-----------VRVSSVLLHEEYDQ-SWSNDIAVMRLQSKLRLGSAVSVIPLADTPPAS---- 136
            :|           .:|..:::|..||: |...|:|::.|...:.|.|. .|.|:.  .|:|    
 Frog   630 KVRLSRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPLTSP-HVQPIC--LPSSTHHF 691

  Fly   137 --GSPATVSGWGAIGFKKNYPMSILSASVDI--VDQDQCRRSYGRKITKDMICAA--APGKDACS 195
              ||...|:|||::  |:|.|.|.:...|||  |.||.|...|..:|:..|:||.  ...||||.
 Frog   692 PTGSSCWVTGWGSV--KENGPTSDVLQKVDIQLVAQDICTELYRYQISPRMLCAGYRDGSKDACQ 754

  Fly   196 GDSGGPLV----SGNKL-VGIVSFGKECAHPEYPGVYANVAELKPWILGAIERIT 245
            ||||.|||    ||... .|:||:|..|..|.|.|||:.:..|..|    ||.||
 Frog   755 GDSGSPLVCKTASGRWFQAGLVSWGAGCGIPRYFGVYSRITRLVQW----IESIT 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 82/239 (34%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 85/245 (35%)
Blue background indicates that the domain is not in the aligned region.

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