DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arts and imb-2

DIOPT Version :9

Sequence 1:NP_001261957.1 Gene:Arts / 59215 FlyBaseID:FBgn0042177 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001309574.1 Gene:imb-2 / 175094 WormBaseID:WBGene00002076 Length:889 Species:Caenorhabditis elegans


Alignment Length:878 Identity:175/878 - (19%)
Similarity:337/878 - (38%) Gaps:200/878 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILDIINGILAIDTERIRESTAKMLKAYENPDSLLVLTQIVMSDR----PVQERQVAAVLLKRRVK 65
            ::.::....:.|.:..|....::::..|:......|..| :||.    ....|.:|.:|||..::
 Worm    13 VIQLLQHAHSTDRDVQRNVQVQLVQLNEHQKFCCYLVYI-LSDMKEMIDATSRSLAGLLLKNNIR 76

  Fly    66 KLRHWQLVPAEHQAAIKSNMLQVLIAVKEKTVKGTVAFIIGSLVRHEEDKQNSWREEILKFIYER 130
              ..|...|.:.:..:::..|: .|..:|..::.||..|:.::|.  |:....| .::|..:...
 Worm    77 --AKWNKYPQDVKFFVRTTCLK-SIGDQEPLIRATVGIIVTTIVM--EENMCDW-PDLLDTLATV 135

  Fly   131 CSSPDPIESERGSSIFSSLMDAAPDQFSNHTDTIFPLLAGILVTAEANGNMATPTVHNMLAGTCV 195
            ...||.:..|........:.:.:.|::  .::.:.|::..:||..|.:.........|.:  .|:
 Worm   136 LMQPDELMQEGALGALQKVFEDSADRY--ESEFLRPIMPKLLVFYEHHAAKMRALAMNCV--NCI 196

  Fly   196 LL-----------PFISG----HSDAEQIMVKAVPLILKALAAFAEKGNSNEFMGAFDIIDSMAE 245
            |:           .|::.    |:|.::.:.|.   :.::|....:..           |:.|..
 Worm   197 LMVNNDPIDFAIDQFLTSLFARHNDNDEEVQKQ---LCRSLTLLLDTH-----------IEKMMP 247

  Fly   246 YVPHLL--------TGNVKLLLEFC---LMIARNKQFDASIRVQVLTFVGSLV------------ 287
            ::|:::        ..|..:.||.|   |.||.|...   .|..||..:..|:            
 Worm   248 HLPNVIEYIIKKTQDHNESIALEACEFWLSIAENSDI---CRTMVLPHLDKLIPVLLGSMRYSET 309

  Fly   288 --RLK---------------KKIIMKQKLLQPTLSVLFEVICQDDLKEGDDDYFSSESLNSPSNA 335
              .||               |....|.|  |..|..|.|   .||.::.|||.......|. ...
 Worm   310 DPALKANDEDSSVPDREEDIKPRFHKSK--QHGLGGLVE---SDDEEDEDDDDDGGGDWNI-RRC 368

  Fly   336 AAQTLDLMALHMVPDKFIPPLLDLLEPALQSPEPVLRRSSFICMGVIAEGCSEAIGKKYLEVMLN 400
            :|.:||::|.....| .:..|..||:..|.:...:::.|..:.:|.|||||.:.: ..:|..::.
 Worm   369 SAASLDVLASIFGKD-LLDKLFPLLKDTLMNDNWLVKESGILALGAIAEGCMDGV-VPHLGELIP 431

  Fly   401 IIKAGVLDSVMFVRTAAFFALGQFSEFL-----------------------------QPTICK-F 435
            .:.|.:.|....||:...:.|.::|..:                             |...|. |
 Worm   432 FMLAMMFDKKPLVRSITCWTLSRYSSHIASDENFRQQFFKDVLANLLRCSLDGNKKVQEAACSAF 496

  Fly   436 A-------PQILPVLFDYLNQLVLELKVGEPDSKHMDRMFYALETFCENLDEDI--VPYLPTLMD 491
            |       .|::|.|.:.|:|||...:..:  :|::..::.|:.|...::.:.:  ..|:..||.
 Worm   497 ATLEEEAGEQLIPFLGEILDQLVKAFQCYQ--AKNLLILYDAIGTLANSVGDALSHPVYVQMLMP 559

  Fly   492 RLFGVMEPQNSNQMREM--ALSAIAAVSAAAKENLMPY----FPRIMTVLQGCLVKDCPKEMYSQ 550
            .|....| :.|::.:|:  .|..|:|:.:|..::.:||    |.|..::::.|:.::....|...
 Worm   560 PLMEKWE-RLSDEDKELFPLLECISAIVSAMGQSFLPYIQPVFTRCCSLIEKCVQQNQQHIMAPD 623

  Fly   551 RIQ---------AIDTLAALCRELGKDNIIPLAD-----ETMNFCLMMLEDGPDDPEFRRSIYNL 601
            :::         |:|.|:.|...| .:::.||..     |.|.||.:.:     .|:.|:|.:.|
 Worm   624 QVEAPETDFIIVALDLLSGLAESL-PEHMDPLVANSKLVELMLFCSLDV-----TPDVRQSCFAL 682

  Fly   602 MSSLSSVVNESMASVFPK---------FIDRIMESVISSEDMVPNVSDNAEDDLAL--------V 649
            :..|:....|   .|.|:         ||..:.:::..|:..|.|.:..|..:|||        .
 Worm   683 LGDLTKACPE---RVLPQSKILQFAGNFIFFLAQNLDPSKISVCNNAIWALGELALKMGPAMKQF 744

  Fly   650 DAPDIEIDLEHTDDEDDQDAYLGENDYIVEKEEAILSLKEFATHTGAAFAPYL------------ 702
            ..|.||..:...:.:.:....|.||..|..........:|.|.|......|..            
 Worm   745 IGPIIEPLIVVINSQQNMQRTLLENTAITIGRLGQCCGEELAPHISRFVRPCCYSLRNIKDNAEK 809

  Fly   703 QSAFENVYKMID-HPQG---DVRMACIDSICSF 731
            :|||..:..||: :|.|   |....| |:|.|:
 Worm   810 ESAFIGLCNMINMNPVGVLNDFIFWC-DAIASW 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArtsNP_001261957.1 IBN_N 29..90 CDD:197981 13/64 (20%)
HEAT repeat 356..384 CDD:293787 7/27 (26%)
HEAT repeat 397..427 CDD:293787 6/29 (21%)
HEAT repeat 438..473 CDD:293787 9/34 (26%)
imb-2NP_001309574.1 KAP95 15..764 CDD:227540 155/796 (19%)
HEAT repeat 128..156 CDD:293787 4/27 (15%)
HEAT repeat 169..201 CDD:293787 7/33 (21%)
HEAT repeat 210..236 CDD:293787 5/28 (18%)
HEAT repeat 249..278 CDD:293787 6/28 (21%)
HEAT repeat 388..416 CDD:293787 7/27 (26%)
HEAT repeat 428..458 CDD:293787 6/29 (21%)
HEAT repeat 467..498 CDD:293787 3/30 (10%)
HEAT repeat 512..539 CDD:293787 6/28 (21%)
HEAT repeat 554..585 CDD:293787 8/31 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.