DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or19a and Orco

DIOPT Version :9

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:470 Identity:75/470 - (15%)
Similarity:156/470 - (33%) Gaps:134/470 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GKRTFWGRHYTAYSMVWNVTFHICIWVSFS-----VNLLQSNSLETFCESLCVTMPHTLYM---- 83
            |...|..:.|::..:|:.:.....|.|:.:     ||.|..|::.|...:.|:|  ..:|:    
  Fly    36 GGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCIT--KFIYLAVNQ 98

  Fly    84 ---LKLINVRRMRGQMISSHWLLRLLDKRLGCDDERQIIMAGIERAEFI--FRTIFRGLACTVV- 142
               .:.:|:    ...:::|.|....|.|.     ..|.:|.:.:..|:  ..|:....|.|.: 
  Fly    99 KNFYRTLNI----WNQVNTHPLFAESDARY-----HSIALAKMRKLFFLVMLTTVASATAWTTIT 154

  Fly   143 -------LGIIYISASSEPT----LMYPTWIPWNWRDS---------TSAYLATAMLHTT----- 182
                   :.:.:.:.||.|.    |...::.|||....         ...|:..:|:|:.     
  Fly   155 FFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSNLCDVM 219

  Fly   183 -----------------------------------------ALMAN--ATLVLNLSSYPGTYLIL 204
                                                     :|.||  :.|:.|....|||.:.:
  Fly   220 FCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDM 284

  Fly   205 VSVHTKALALRVSKLGYGA--------------------------PLPAVRMQAILVG-----YI 238
            ..:::       ||..:||                          |....:.|.::|.     ::
  Fly   285 SGIYS-------SKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWV 342

  Fly   239 HDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICY-FLLFGNVGIMRFMNMLFLLVILTTETL 302
            ..|:.::||..::..:......|...::......:.| ......|.:..|..:.:|...| .:..
  Fly   343 ERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVNVYAFTVVGYLGYAL-AQVF 406

  Fly   303 LLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVM 367
            ..|.......:|..|::.|.|||:|...|...:..:.::..:||..|.:.......:|:..|..:
  Fly   407 HFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASV 471

  Fly   368 IKGAYTMLTLLNEIR 382
            :....|...:|.:::
  Fly   472 LGAVVTYFMVLVQLK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 63/416 (15%)
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 67/420 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.