DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19a and Or56a

DIOPT Version :9

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:380 Identity:74/380 - (19%)
Similarity:153/380 - (40%) Gaps:73/380 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 IWVSFSVNLLQ----SNSLETFCESLCVTMPHTLYMLKLINVRRMRGQMISSHWLLRL----LDK 108
            ||:|.::.|.:    ..:|.....|....:.:....:.:.|....|.::||   |||:    :..
  Fly    54 IWLSCALMLARVFRGYENLNDGATSYATAVQYFAVSIAMFNAYVQRDKVIS---LLRVAHSDIQN 115

  Fly   109 RLGCDDERQI---------------------IMAGI-ERAEFIFRTIFRGLACTVVLGIIYISAS 151
            .:...|.|::                     ::||: ..::.|:|::|...:   |..:..:...
  Fly   116 LMHEADNREMELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLPKS---VFNVPAVRRG 177

  Fly   152 SE-PTLMYPTWIPWN-------------WRDSTSAYLATAMLHT--TALMANATLVLNLSSYPGT 200
            .| |.|::..: |:.             |........|..:.||  |.||....|.|.:.:....
  Fly   178 EEHPILLFQLF-PFGELCDNFVVGYLGPWYALGLGITAIPLWHTFITCLMKYVNLKLQILNKRVE 241

  Fly   201 YLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQF-- 263
            .:.:..:::|.:..|::    .:.|...:|| :...::.:...|.:..:.|:..:.:.....|  
  Fly   242 EMDITRLNSKLVIGRLT----ASELTFWQMQ-LFKEFVKEQLRIRKFVQELQYLICVPVMADFII 301

  Fly   264 FSTACAQCTICYFLLFGNVGIMRFMNMLFLLVIL-TTETLLLCY----TAELPCKEGESLLTAVY 323
            ||.     .||:......||:...|:..|:.:.| ....:|..|    |..:.|.:..||  |.:
  Fly   302 FSV-----LICFLFFALTVGVPSKMDYFFMFIYLFVMAGILWIYHWHATLIVECHDELSL--AYF 359

  Fly   324 SCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLL 378
            ||.|.:..:..:::|:.|:...|.|| .:..::|.::::||..:.:|||:...||
  Fly   360 SCGWYNFEMPLQKMLVFMMMHAQRPM-KMRALLVDLNLRTFIDIGRGAYSYFNLL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 66/355 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 55/297 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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