DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or19a and Or47b

DIOPT Version :9

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster


Alignment Length:385 Identity:68/385 - (17%)
Similarity:141/385 - (36%) Gaps:100/385 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VNLLQSNSLETFCESLCVTMPHTLYMLKLINVRRMRGQMISSHWL-------LRLLDKRLGCDDE 115
            :||....::.|...::.|.:|.:.      ||..|...::   |:       .::....|.||:.
  Fly    64 INLFIMCNVMTIFWTMFVALPESK------NVIEMGDDLV---WISGMALVFTKIFYMHLRCDEI 119

  Fly   116 RQII------------------MAGIERAEFIFRTIFRGLACTVVLGIIYISAS--SEPTL---- 156
            .::|                  :.|.:|..::..:   ||.......:.:.||:  .:|.|    
  Fly   120 DELISDFEYYNRELRPHNIDEEVLGWQRLCYVIES---GLYINCFCLVNFFSAAIFLQPLLGEGK 181

  Fly   157 -----MYP------------TWIPWNWRDSTSAYLATAMLHTTALMANATLVLNLSSYPGTYLIL 204
                 :||            .|..:.|:..||.:...::|...        ::.:|::..|.|.|
  Fly   182 LPFHSVYPFQWHRLDLHPYTFWFLYIWQSLTSQHNLMSILMVD--------MVGISTFLQTALNL 238

  Fly   205 VSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACA 269
                 |.|.:.:.||| ...:...|........:..||.|::|.....|:.:.....|..::   
  Fly   239 -----KLLCIEIRKLG-DMEVSDKRFHEEFCRVVRFHQHIIKLVGKANRAFNGAFNAQLMAS--- 294

  Fly   270 QCTICYFLLFGNVGIMRFMNM-------------LFLLVILTTETLLLCYTAELPCKEGESLLTA 321
                     |..:.|..|..|             :.|:::...:..|.|.:..|...:...:..|
  Fly   295 ---------FSLISISTFETMAAAAVDPKMAAKFVLLMLVAFIQLSLWCVSGTLVYTQSVEVAQA 350

  Fly   322 VYSCN-WLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNE 380
            .:..| |.::|...:|.:..::.|.|.|::.|:...:|.::.|:.:::|..|.:|.|:.|
  Fly   351 AFDINDWHTKSPGIQRDISFVILRAQKPLMYVAEPFLPFTLGTYMLVLKNCYRLLALMQE 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 62/368 (17%)
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 59/345 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465263
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.