DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19a and Or43a

DIOPT Version :10

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster


Alignment Length:226 Identity:51/226 - (22%)
Similarity:92/226 - (40%) Gaps:41/226 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 AYLATAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVG 236
            |.|.|.:|.:...|...:|...|:.: |..::.:.||      |:.::|........|.|. |..
  Fly   173 AQLPTPLLLSMMYMPFVSLFAGLAIF-GKAMLQILVH------RLGQIGGEEQSEEERFQR-LAS 229

  Fly   237 YIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFGNVGIMRFMNMLFLLVILTTET 301
            .|..|..::|....|.:.:             |.......::||::    ..::||.|.|:|:.|
  Fly   230 CIAYHTQVMRYVWQLNKLV-------------ANIVAVEAIIFGSI----ICSLLFCLNIITSPT 277

  Fly   302 ------------LLLCYT----AELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMI 350
                        |.:.:|    |...|.|...:..|||:..|......||:.||:.|.:.|.||.
  Fly   278 QVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPME 342

  Fly   351 LVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381
            :..|.:.|:::..|..::..:|:..|:|..:
  Fly   343 IRVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 48/215 (22%)
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 48/215 (22%)

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