DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19a and Or42b

DIOPT Version :10

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:384 Identity:100/384 - (26%)
Similarity:171/384 - (44%) Gaps:36/384 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 WRIFRIMGIHPP--GKRTFWGRHYTAYSMVWNVTFHICIWVSFSVNLLQSNSLETFCESLCVTMP 78
            :|..:.:|..||  |...:....:|..:.||..|:....::...:..::|.|...|..||.|.:.
  Fly    25 YRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCIN 89

  Fly    79 HTLYMLKLINVRRMRGQMISSHWLLRLLDKRLGCDDERQ---IIMAGIERAEFIFRTIFRGLACT 140
            .....:|:.....|..::|.:..:|..||.|....:||:   :::|....|..||..::.|.|  
  Fly    90 AYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREKIHLVVARSNHAFLIFTFVYCGYA-- 152

  Fly   141 VVLGIIYIS---ASSEPTLMYPTWIPWN------WRDSTSAYLATAMLHTTALMANATLVLNLS- 195
               |..|:|   :...|..:|..:|.|:      |..||..|:         :|:.|.|...|| 
  Fly   153 ---GSTYLSSVLSGRPPWQLYNPFIDWHDGTLKLWVASTLEYM---------VMSGAVLQDQLSD 205

  Fly   196 SYPGTYLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMTCF 260
            |||..|.:::..|...|..|:.:|.....|........||..:.||::|||....::..:..|.|
  Fly   206 SYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQGTIF 270

  Fly   261 LQFFSTACA-QCTICYFLLFGNV--GIMRFMNMLFLLVILTTETLLLCYTAELPCKEGESLLTAV 322
            .||...... ..|:.....|.::  ||..||   |::.|| .:|...|||..|..::.|||..|:
  Fly   271 TQFLLIGLVLGFTLINVFFFSDIWTGIASFM---FVITIL-LQTFPFCYTCNLIMEDCESLTHAI 331

  Fly   323 YSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381
            :..||:..|..::..||..|...|.|::.::|.|..|||.:...:.|.|::::|:..::
  Fly   332 FQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQM 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 88/322 (27%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 88/322 (27%)

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