DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or19a and Or30a

DIOPT Version :9

Sequence 1:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster


Alignment Length:416 Identity:80/416 - (19%)
Similarity:159/416 - (38%) Gaps:76/416 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDISKVD--------STRALVNHWRIFRIMGIHPPGKRTFWGRHYTAYS--MVWNVTFHICIWVS 55
            |::..:|        ||..|:..|   ..:.:|.      | |.|.|.:  ::.|.|.::.|::|
  Fly     1 MELKSMDPVEMPIFGSTLKLMKFW---SYLFVHN------W-RRYVAMTPYIIINCTQYVDIYLS 55

  Fly    56 FSVNLLQSNSLETFCES--LCVTMPHTLYMLKLINVRRM---RGQMISSHWLLRLLDKRLGCDDE 115
                   :.||:....:  |.|...:|:....|:.|:|.   |...|...:.:.||..    ||.
  Fly    56 -------TESLDFIIRNVYLAVLFTNTVVRGVLLCVQRFSYERFINILKSFYIELLQS----DDP 109

  Fly   116 -RQIIMAGIERAEFIFRTIFRGLACTVVLGII-YISASSEPTLMYPTWIPW--NWRDSTSAYLAT 176
             ..|::....|...:...|...:.|...:|.: |....||..|.|..::|.  .::.::..|...
  Fly   110 IINILVKETTRLSVLISRINLLMGCCTCIGFVTYPIFGSERVLPYGMYLPTIDEYKYASPYYEIF 174

  Fly   177 AMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLG-------YGAPLPAVRMQAIL 234
            .::..........:.:..::...|:.:...:..:.|..::..|.       .|..:..::.|..|
  Fly   175 FVIQAIMAPMGCCMYIPYTNMVVTFTLFAILMCRVLQHKLRSLEKLKNEQVRGEIIWCIKYQLKL 239

  Fly   235 VGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFG---------NVGIMRFMNM 290
            .|::..       ..:|...|.:..||.|.:..|.       |||.         .|.::.:|.|
  Fly   240 SGFVDS-------MNALNTHLHLVEFLCFGAMLCV-------LLFSLIIAQTIAQTVIVIAYMVM 290

  Fly   291 LFLLVILTTETLLLCYTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGV 355
            :|      ..:::|.|.|.....:...:..|.|..||:...|:.::.|..::.|.|.|:.::.|.
  Fly   291 IF------ANSVVLYYVANELYFQSFDIAIAAYESNWMDFDVDTQKTLKFLIMRSQKPLAILVGG 349

  Fly   356 IVPISMKTFTVMIKGAYTMLTLLNEI 381
            ..|:::|....::...|:..|||..:
  Fly   350 TYPMNLKMLQSLLNAIYSFFTLLRRV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 61/331 (18%)
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 61/331 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465771
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326193at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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