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Protein Alignment CG18823 and Ncoa5
DIOPT Version :9
Sequence 1: | NP_659571.1 |
Gene: | CG18823 / 59184 |
FlyBaseID: | FBgn0042146 |
Length: | 106 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100013.1 |
Gene: | Ncoa5 / 296372 |
RGDID: | 1307702 |
Length: | 578 |
Species: | Rattus norvegicus |
Alignment Length: | 68 |
Identity: | 15/68 - (22%) |
Similarity: | 29/68 - (42%) |
Gaps: | 17/68 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 SLIVDN--------EGFIQFARESE---ATSAIDALDQIVFKSKVLQVSNATF------PPIEGG 89
:|:.|| :..|.:.||.: ..|:.|:|...:.:..:...|.::. .|::.|
Rat 346 NLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGAASGSSLKTQPSSQPLQSG 410
Fly 90 QVL 92
|||
Rat 411 QVL 413
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG18823 | NP_659571.1 |
RRM |
<9..>79 |
CDD:223796 |
9/47 (19%) |
RRM_1 |
16..76 |
CDD:278504 |
9/44 (20%) |
Ncoa5 | NP_001100013.1 |
HisS |
<185..255 |
CDD:223202 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D421126at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0006056 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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