Protein Alignment CG18823 and rbm20

DIOPT Version :9

• Sequence 1: NP_659571.1
• Gene: CG18823 / 59184
• FlyBaseID: FBgn0042146
• Length: 106
• Species: Drosophila melanogaster
• Sequence 2: XP_002942947.3
• Gene: rbm20 / 100495938
• XenbaseID: XB-GENE-6465465
• Length: 1064
• Species: Xenopus tropicalis
• Alignment Length: 69
• Identity: 18/69 - (26%)
• Similarity: 37/69 - (53%)
• Gaps: 9/69 - (13%)

  Fly    16 IWVRNLP--PCTRQELVMLCLPFGKILGSLIV--DNEGFIQFARESEATSAIDALDQIVFKSKVL 76
            :.:.|:|  .|...::|.|.|||||:...:::  .|:.|::.|    .|.|.:|:.|. ::.|..
 Frog   399 VHICNIPEGSCNENDVVNLGLPFGKVTNYILMKSTNQAFLEMA----YTEAAEAMVQF-YQEKPA 458

  Fly    77 QVSN 80
            .:::
 Frog   459 MIND 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18823	NP_659571.1	RRM	<9..>79	CDD:223796	18/66 (27%)
		RRM_1	16..76	CDD:278504	18/63 (29%)
rbm20	XP_002942947.3	RRM_RBM20	397..472	CDD:410086	18/69 (26%)
		PTZ00121	<562..>756	CDD:173412
		ZnF_U1	996..1030	CDD:197732

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1545178at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010