DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan13a

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001002334.1 Gene:tspan13a / 798836 ZFINID:ZDB-GENE-040718-19 Length:203 Species:Danio rerio


Alignment Length:230 Identity:54/230 - (23%)
Similarity:94/230 - (40%) Gaps:46/230 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSC-GISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIIL 64
            |:| |....|..|.|.||:..:..:|||  |...:.|      :...:.:..|...:|.:|..:.
Zfish     1 MACGGFVCSKTCLCILNLIYVLVSLLLI--GVAAWGK------WFGLVSSFSVMGAVIAVGLFLF 57

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQL----ALVIYMWVQKDKYLEIMGDVVEKAWNHR 125
            :::..|.|||::....:...|..:||::.|.|.    |.:.....|::..|||       .||  
Zfish    58 IVAIIGLCGAVKHHQVLLFFYMFILFLVFIVQFSVSCACLAINKEQQNLLLEI-------GWN-- 113

  Fly   126 TSRSDYMDA-IQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFWDRNS 189
              :|:.|.: ::.|:.||   .:....|.|....:|..: ..|       :.|.|....:.|   
Zfish   114 --KSESMQSDLERSLNCC---DFLQVDYSGSCEATCFKE-KTC-------KPCSVIIQAYAD--- 162

  Fly   190 DIIKYAG---LVIAAIEFVGFVFACCLANSIRNYR 221
            |.:::.|   |..:..|.:||    .||...||.:
Zfish   163 DALQFVGGISLFFSFTEILGF----WLAYRYRNQK 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 48/214 (22%)
tspan13aNP_001002334.1 Tetraspanin 9..189 CDD:459767 49/216 (23%)

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