DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and TSPAN6

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:230 Identity:61/230 - (26%)
Similarity:107/230 - (46%) Gaps:19/230 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEAL--RTQQVPVTMIILGTIILLIS 67
            |:..|.:|.|:..:..|.|::|:..|  ::.|| :::::...|  :...||..:|..||:|:|:.
Human    14 ITCFKSVLLIYTFIFWITGVILLAVG--IWGKV-SLENYFSLLNEKATNVPFVLIATGTVIILLG 75

  Fly    68 WFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRSDY- 131
            .|||....|.|..|...|::.|.::.:.:|...|..:|.:.:......:..|||.....|..|| 
Human    76 TFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYR 140

  Fly   132 ---MDAIQISMKCCGRSGYTDYA----YQGK-FPPSCCSDTNNCR----WETVYRRGCKVTFVEF 184
               :|.||.::.|||.:.|.|:.    |..| ||.|||. ..:|.    .:.|...||.:..:..
Human   141 SHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCK-LEDCTPQRDADKVNNEGCFIKVMTI 204

  Fly   185 WDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRN 219
            .:....::......:|..:.:|...|.||:.:|.|
Human   205 IESEMGVVAGISFGVACFQLIGIFLAYCLSRAITN 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 58/221 (26%)
TSPAN6NP_003261.1 Tetraspanin 17..235 CDD:459767 58/221 (26%)
TM4SF2_6_like_LEL 112..209 CDD:239414 26/97 (27%)

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